RetrogeneDB ID: | retro_etel_1606 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_282554:1392..1738(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000003913 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000015057 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 80.51 % |
Parental protein coverage: | 54.46 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | RRIAPRPASGPIRPIVRCPTVRYHTK-VRAGRG-FSLEELRVAGIHKKVARTIGISVDPRRRNKSTESLQ |
RR.A......PI.PIVRCP.VRYHTK.V.AGRG.FSLEELR.AGIHK.VARTI..SVDPRRRN.STESLQ | |
Retrocopy | RRKAGQAKADPICPIVRCPMVRYHTK<VLAGRG<FSLEELRMAGIHKTVARTICVSVDPRRRNRSTESLQ |
Parental | ANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPIRN |
.NVQ.LK.YRSKL.LFPRKPSAPKKGDSSAEELKLA.QLTG.VMPIRN | |
Retrocopy | VNVQQLKKYRSKLFLFPRKPSAPKKGDSSAEELKLAMQLTGSVMPIRN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |