RetrogeneDB ID: | retro_etel_852 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_17582:160..510(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FUNDC1 | ||
Ensembl ID: | ENSETEG00000012763 | ||
Aliases: | None | ||
Description: | FUN14 domain containing 1 [Source:HGNC Symbol;Acc:28746] |
Percent Identity: | 77.31 % |
Parental protein coverage: | 80.69 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | YESDDESYEVLDLTEYARRHHWWNRVFGHSSGPMVEKYSVAT-QIVMGGVTGWCAGFLFQKVGKLAATAV |
YES...S..VLDLTEYA..HHW.N..FGHSSG.MVEKYSVAT.Q.VMGGVTGWCA.FLF.KVGKL.ATAV | |
Retrocopy | YESENKS*GVLDLTEYAQ-HHW*NQGFGHSSGVMVEKYSVATIQFVMGGVTGWCARFLFLKVGKLVATAV |
Parental | GGGFLLLQIASHSGYVQVDWKRVEKDVNKAKRQIKKRA-NKAAPEINNI |
.GGFLLLQ.ASHSG.V...WKR.EKDV.KAKRQIKK.A.NKAAPEIN.I | |
Retrocopy | AGGFLLLQTASHSGSVRINWKRDEKDVTKAKRQIKKHA<NKAAPEINRI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |