RetrogeneDB ID: | retro_itri_1634 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393595.1:1018854..1019139(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.76 % |
Parental protein coverage: | 77.6 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | VTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRNVPYRIRVRLSR |
VT..YT..IHK.IH.V.FKK.A...L.EI.KFAMKEMGTPDV..DTR.N......GIRN.P.R..V.LS. | |
Retrocopy | VTLDYTTKIHKHIHEVDFKKCALQLLREIQKFAMKEMGTPDVCVDTRINNVF*IEGIRNAPCRTCVGLS* |
Parental | KRNEDEDSPNKLYTLVTYVPVTTFKNL |
K..ED.D..NKLY....YVP.T.FKN. | |
Retrocopy | KHYEDKDDTNKLY--ADYVPITSFKNV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |