RetrogeneDB ID: | retro_itri_680 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393310.1:8771150..8771513(-) | ||
Located in intron of: | ENSSTOG00000008673 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.87 % |
Parental protein coverage: | 96. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | MAPAKKGGEKKKGRSAINEVVT-REYTINIHKRIHGVGFKKRAPRAL-KEIRK-FAMKEMGTPDVRIDTR |
MAP.KKGG.KKKGRSAINEVVT..EYTINIHK.IHGVGFKK.AP.AL.K..R..FAMKEMGTPDVRIDTR | |
Retrocopy | MAPGKKGG-KKKGRSAINEVVT>GEYTINIHKLIHGVGFKKCAPWAL>KRSRNLFAMKEMGTPDVRIDTR |
Parental | LNKAVWAKGIRNVPYRIRVRLSRKR-NEDEDSPNKLYTLVTYVPVTTFKNLQTV |
LNKAVWAKGIRNVPY.I.V.LSRKR..EDEDSPNKLYTLVTYVPVTT.KNLQ.. | |
Retrocopy | LNKAVWAKGIRNVPYHICVQLSRKR>KEDEDSPNKLYTLVTYVPVTTLKNLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |