RetrogeneDB ID: | retro_itri_298 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393283.1:7692641..7692975(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000010902 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 82.14 % |
Parental protein coverage: | 88.8 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | KKKGRSAINEVVTREYTINIHKRIHGVGFKKRAPRALKEIRKFAMKEMGTPDVRIDTRLNKAVWAKGIRN |
.KKG.SA.N.VVT.EYTINIHK.IHGVGFKK.APR.LKEIRKFAMKE..TP.V.IDTRLNKAVWAKGIRN | |
Retrocopy | RKKGYSAFNKVVTWEYTINIHKYIHGVGFKKCAPRTLKEIRKFAMKEIRTPNVCIDTRLNKAVWAKGIRN |
Parental | VPYRIRVRLSR-KRNEDEDSPNKLYTLVTYVPVTTFKNLQTV |
VPY.I.VRLSR.K.N.DEDSPNKLYTLVTYV.VTTFKNLQ.. | |
Retrocopy | VPYCIGVRLSR>KSNQDEDSPNKLYTLVTYVSVTTFKNLQSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |