RetrogeneDB ID: | retro_lafr_1136 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_75:5860679..5860964(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSLAFG00000030052 | ||
Aliases: | None | ||
Description: | Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:G3U3B7] |
Percent Identity: | 85.26 % |
Parental protein coverage: | 97.94 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | KGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVYR |
KGTSSFGK..NKTHTLCRRCGSKAYHLQK.T.GKCGY.AK.KRKYNWSAKAKRRNTT.TG.MRHLK.V.. | |
Retrocopy | KGTSSFGKLLNKTHTLCRRCGSKAYHLQKWTSGKCGYSAKCKRKYNWSAKAKRRNTTSTG*MRHLKTVHH |
Parental | RFRHGFREGTTPKPKRAAVAASSSS |
RFRHGF.EG.TPKPKRAAVA.SSSS | |
Retrocopy | RFRHGFCEGATPKPKRAAVAGSSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |