RetrogeneDB ID: | retro_lafr_374 | ||
Retrocopylocation | Organism: | Elephant (Loxodonta africana) | |
Coordinates: | scaffold_14:19216248..19216527(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL37 | ||
Ensembl ID: | ENSLAFG00000030052 | ||
Aliases: | None | ||
Description: | Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:G3U3B7] |
Percent Identity: | 70.83 % |
Parental protein coverage: | 98.97 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | TKGTSSFGKRRNKTHTLCRRCGSKAYHLQKSTCGKCGYPAKRKRKYNWSAKAKRRNTTGTGRMRHLKIVY |
TK..SSFG....KTH.LC..CGS.A.HLQKSTCGKCGYPAK.KRKYNWSAKAKR.N.TG.G.MRHLKIV. | |
Retrocopy | TKRVSSFGRHCSKTHMLCCHCGSRACHLQKSTCGKCGYPAKCKRKYNWSAKAKR*NATGIGQMRHLKIVL |
Parental | RRFRHGFREGTTPKPKRAAVAASSSS |
R.....F.E.T.PKPKRAA...SSSS | |
Retrocopy | RQ---AFCEETIPKPKRAADEGSSSS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |