Parental gene:

RPL37, ENSLAFG00000030052

Aliases:None
Description:Ribosomal protein L37 [Source:UniProtKB/TrEMBL;Acc:G3U3B7]
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_7:45522417..45524476(-)


>ENSLAFG00000030052
CAGACGAAGGGAACGTCATCGTTTGGAAAGCGTCGCAATAAGACGCACACGTTGTGCCGCCGCTGTGGCTCTAAGGCCTA
CCACCTTCAGAAGTCGACCTGTGGCAAATGTGGCTACCCTGCCAAGCGCAAGAGGAAGTATAATTGGAGTGCCAAGGCTA
AAAGACGAAATACCACCGGCACTGGTCGAATGAGACACCTAAAAATTGTATACCGCAGATTCAGGCATGGATTCCGCGAA
GGAACAACACCTAAACCCAAGAGGGCAGCTGTTGCAGCATCCAGTTCATCT

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000005142 ortholog_one2many 6 retrogenes
retro_btau_1430, retro_btau_1502, retro_btau_1575, retro_btau_1670, retro_btau_181, retro_btau_243,
Callithrix jacchus ENSCJAG00000007388 ortholog_one2many 10 retrogenes
retro_cjac_107, retro_cjac_1443, retro_cjac_169, retro_cjac_2091, retro_cjac_2443, retro_cjac_247, retro_cjac_2495, retro_cjac_2654, retro_cjac_2956, retro_cjac_332,
Homo sapiens ENSG00000145592 ortholog_one2one 21 retrogenes
retro_hsap_1277, retro_hsap_1424, retro_hsap_156, retro_hsap_1747, retro_hsap_1763, retro_hsap_2009, retro_hsap_2120, retro_hsap_2239, retro_hsap_2265, retro_hsap_2499, retro_hsap_2515, retro_hsap_2923, retro_hsap_343, retro_hsap_3610, retro_hsap_3901, retro_hsap_3958, retro_hsap_4685, retro_hsap_537, retro_hsap_795, retro_hsap_887, retro_hsap_953,
Latimeria chalumnae ENSLACG00000002787 possible_ortholog 1 retrogene
retro_lcha_6,
Myotis lucifugus ENSMLUG00000001565 ortholog_one2one 10 retrogenes
retro_mluc_1037, retro_mluc_1334, retro_mluc_1441, retro_mluc_1651, retro_mluc_1897, retro_mluc_1917, retro_mluc_2006, retro_mluc_454, retro_mluc_738, retro_mluc_959,
Macaca mulatta ENSMMUG00000023807 possible_ortholog 6 retrogenes
retro_mmul_1602, retro_mmul_1672, retro_mmul_206, retro_mmul_329, retro_mmul_976, retro_mmul_997,
Monodelphis domestica ENSMODG00000020301 possible_ortholog 3 retrogenes
retro_mdom_130, retro_mdom_1843, retro_mdom_942,
Mus musculus ENSMUSG00000041841 ortholog_one2one 28 retrogenes
retro_mmus_1333, retro_mmus_1360, retro_mmus_1425, retro_mmus_1560, retro_mmus_1717, retro_mmus_1732, retro_mmus_1804, retro_mmus_1813, retro_mmus_2067, retro_mmus_2379, retro_mmus_2385, retro_mmus_2513, retro_mmus_2559, retro_mmus_2575, retro_mmus_2691, retro_mmus_2811, retro_mmus_2838, retro_mmus_3090, retro_mmus_3222, retro_mmus_3343, retro_mmus_3345, retro_mmus_3364, retro_mmus_3455, retro_mmus_3493, retro_mmus_3503, retro_mmus_3504, retro_mmus_3674, retro_mmus_438,
Nomascus leucogenys ENSNLEG00000016508 ortholog_one2one 4 retrogenes
retro_nleu_1841, retro_nleu_2065, retro_nleu_2407, retro_nleu_77,
Oryctolagus cuniculus ENSOCUG00000029674 ortholog_one2one 11 retrogenes
retro_ocun_1063, retro_ocun_1269, retro_ocun_1476, retro_ocun_1491, retro_ocun_1514, retro_ocun_1870, retro_ocun_295, retro_ocun_683, retro_ocun_771, retro_ocun_879, retro_ocun_956,
Otolemur garnettii ENSOGAG00000034300 ortholog_one2many 7 retrogenes
retro_ogar_127, retro_ogar_1308, retro_ogar_1662, retro_ogar_1667, retro_ogar_2670, retro_ogar_662, retro_ogar_76,
Pongo abelii ENSPPYG00000015422 ortholog_one2one 26 retrogenes
retro_pabe_1058, retro_pabe_1180, retro_pabe_1443, retro_pabe_1532, retro_pabe_1643, retro_pabe_1705, retro_pabe_1756, retro_pabe_1840, retro_pabe_1851, retro_pabe_1865, retro_pabe_1951, retro_pabe_1967, retro_pabe_1985, retro_pabe_212, retro_pabe_2403, retro_pabe_2432, retro_pabe_2962, retro_pabe_3180, retro_pabe_3260, retro_pabe_353, retro_pabe_3549, retro_pabe_3638, retro_pabe_466, retro_pabe_634, retro_pabe_707, retro_pabe_813,
Pan troglodytes ENSPTRG00000016822 ortholog_one2one 20 retrogenes
retro_ptro_1208, retro_ptro_1219, retro_ptro_1338, retro_ptro_1451, retro_ptro_1460, retro_ptro_152, retro_ptro_1552, retro_ptro_1584, retro_ptro_1605, retro_ptro_1978, retro_ptro_2440, retro_ptro_2654, retro_ptro_2687, retro_ptro_273, retro_ptro_403, retro_ptro_553, retro_ptro_613, retro_ptro_660, retro_ptro_873, retro_ptro_974,
Rattus norvegicus ENSRNOG00000012538 ortholog_one2many 6 retrogenes
retro_rnor_171, retro_rnor_181, retro_rnor_220, retro_rnor_246, retro_rnor_321, retro_rnor_325,
Sarcophilus harrisii ENSSHAG00000013969 possible_ortholog 4 retrogenes
retro_shar_295, retro_shar_350, retro_shar_395, retro_shar_715,
Sus scrofa ENSSSCG00000025883 ortholog_one2one 5 retrogenes
retro_sscr_1004, retro_sscr_1220, retro_sscr_1221, retro_sscr_767, retro_sscr_872,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_215 67.02 94.85
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2. retro_lafr_374 70.83 98.97
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3. retro_lafr_448 74.19 95.88
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4. retro_lafr_507 71.43 98.97
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5. retro_lafr_532 73.96 98.97
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6. retro_lafr_619 80.00 97.94
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7. retro_lafr_775 61.46 96.91
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8. retro_lafr_985 62.50 96.91
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9. retro_lafr_986 71.88 98.97
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10. retro_lafr_1101 67.12 73.20
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11. retro_lafr_1123 82.72 83.51
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12. retro_lafr_1125 71.13 98.97
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13. retro_lafr_1136 85.26 97.94
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Download FASTA sequences of all ENSLAFG00000030052 retrocopies