RetrogeneDB ID: | retro_meug_633 | ||
Retrocopylocation | Organism: | Wallaby (Macropus eugenii) | |
Coordinates: | Scaffold149339:865..1157(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL11 | ||
Ensembl ID: | ENSMEUG00000013738 | ||
Aliases: | None | ||
Description: | ribosomal protein L11 [Source:HGNC Symbol;Acc:10301] |
Percent Identity: | 60.95 % |
Parental protein coverage: | 56.18 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 5 |
Parental | MAQDQGEKENPMRELRIRKLCLNICVGESG-DRLTRAAK-VLEQLTGQTPVFS-KARYTVRSFG-IRRNE |
M.Q.QGEKENPM.EL.I..LC....V.ESG..RLT.A.K..L.QLT..T.VF..K..YTV.SFG.IRRNE | |
Retrocopy | MVQAQGEKENPMGELCI*NLCFHTGVRESG<ERLTWATK<KLGQLTAKTLVFA<KV*YTVISFG<IRRNE |
Parental | KIAVHCTVRGA-KAEEILEKGLKVREYELRKNNFS |
.I.V.CTV.G..K.EEIL.K.LK...Y.LRK.NFS | |
Retrocopy | -IIVNCTVHGS<KTEEILQKILKELGY*LRKDNFS |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |