RetrogeneDB ID: | retro_mluc_1922 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429949:2725209..2725657(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PPIH | ||
Ensembl ID: | ENSMLUG00000025400 | ||
Aliases: | None | ||
Description: | Peptidyl-prolyl cis-trans isomerase [Source:UniProtKB/TrEMBL;Acc:G1Q881] |
Percent Identity: | 71.24 % |
Parental protein coverage: | 84.27 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | MAVANSSPVN-PVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVI |
MAVANSSPVN.P.VF.DVSIGG..VG...I.LFAD.V.K.AENFRQFCTGEFRKD.VPIG.K...F.... | |
Retrocopy | MAVANSSPVN<PGVFIDVSIGGRKVGCLEIKLFADLVTKAAENFRQFCTGEFRKDRVPIGCK-VAFSQGY |
Parental | KDF-MIQGGDFVNGDGTGVASIYRGPFADE-NFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGK |
K.F.MIQ.GDF.NGDGTGVASIYRGPFAD..NFK.RHSA.GLL..ANSGPSTN.C..FITCSK..WLDGK | |
Retrocopy | KGF>MIQSGDFINGDGTGVASIYRGPFADL>NFKFRHSARGLLPIANSGPSTNDC*AFITCSKGAWLDGK |
Parental | HVVFGKLENAMQI |
H.VFGK....... | |
Retrocopy | HAVFGKITDGLLV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |