RetrogeneDB ID: | retro_tsyr_224 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | GeneScaffold_5800:11808..12076(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PPIH | ||
Ensembl ID: | ENSTSYG00000003182 | ||
Aliases: | None | ||
Description: | peptidylprolyl isomerase H (cyclophilin H) [Source:HGNC Symbol;Acc:14651] |
Percent Identity: | 82.22 % |
Parental protein coverage: | 50.28 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | VGRMKIELFADVVPKTAENFXXXXTGEFRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYR- |
.GRMKIELF.D.VPKTAEN.....T.EFRKDGVPIGYKGSTFHRVIKDF..QG.DFV.GDG.GVASIYR. | |
Retrocopy | IGRMKIELFSDFVPKTAENCRQFCTREFRKDGVPIGYKGSTFHRVIKDFRTQGRDFVSGDGAGVASIYR> |
Parental | GPFADENFKLRHSAPGLLSM |
GPF.DENFKLRHSAPGLLSM | |
Retrocopy | GPFEDENFKLRHSAPGLLSM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |