RetrogeneDB ID: | retro_mluc_2147 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430061:741127..741441(+) | ||
Located in intron of: | ENSMLUG00000001663 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSMLUG00000000585 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 58.72 % |
Parental protein coverage: | 96.43 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MAAYEQVQKGPLKLKGVAELGVTKRKKKK-KDKDKAKLLEAMGTSKKNEEEKRRGLDKRTPAQAAFEKMQ |
.AAYEQVQKGP.KL.G.AELGVTKR.KKK.KDKD..KLL...GTSKKN.E....G.....P......K.. | |
Retrocopy | LAAYEQVQKGP*KLRGIAELGVTKR-KKK<KDKDIVKLLVIRGTSKKNREVAWPG--QADPGPGSLRKRR |
Parental | EKRQMERILKKASKTHKQRVEDFNRHLDTLTEHYDIPKV |
........LKK.SKTHKQRVE.F.RH...L.EH.DIPKV | |
Retrocopy | RGGSKWK*LKKTSKTHKQRVEEFTRHPEALREHCDIPKV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000046846 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000014097 | 4 retrocopies | |
Homo sapiens | ENSG00000105058 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000022418 | 4 retrocopies | |
Loxodonta africana | ENSLAFG00000009394 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000013721 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000000585 | 2 retrocopies |
retro_mluc_2147 , retro_mluc_59,
|
Monodelphis domestica | ENSMODG00000014904 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000016048 | 1 retrocopy | |
Mus musculus | ENSMUSG00000003039 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000005441 | 3 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000002238 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000027763 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000010641 | 4 retrocopies | |
Rattus norvegicus | ENSRNOG00000039528 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000013855 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000009106 | 1 retrocopy |