RetrogeneDB ID: | retro_tsyr_418 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_113643:647..973(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | FAM32A | ||
Ensembl ID: | ENSTSYG00000009106 | ||
Aliases: | None | ||
Description: | family with sequence similarity 32, member A [Source:HGNC Symbol;Acc:24563] |
Percent Identity: | 70.91 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | MEAYEQVQKGALKLKGVAELSVAKRKKKKDKDKAKLLEAMGTSKKNEEEKRRGLDKRT-PAQAAFEKMQE |
MEAY.QVQKG..KLKG..EL.VAK.KK.KDKDK.KLLEAMG.SKKN.EEK..GL.K.T...QAAFEK.QE | |
Retrocopy | MEAYVQVQKGPPKLKGLVELDVAKQKKNKDKDKVKLLEAMGISKKNKEEKQ*GLEK*T<TSQAAFEKTQE |
Parental | KRQMERILTKASKTHKQRVEDFLPHL-TLCD-YNVLKVSW |
K.QME..L.KASKTHKQRVEDF..HL.TL....N..KVSW | |
Retrocopy | KQQMEGVLKKASKTHKQRVEDFNRHLDTLMEHHNIPKVSW |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000046846 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000014097 | 4 retrocopies | |
Homo sapiens | ENSG00000105058 | 4 retrocopies | |
Gorilla gorilla | ENSGGOG00000022418 | 4 retrocopies | |
Loxodonta africana | ENSLAFG00000009394 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000013721 | 3 retrocopies | |
Myotis lucifugus | ENSMLUG00000000585 | 2 retrocopies | |
Monodelphis domestica | ENSMODG00000014904 | 1 retrocopy | |
Mustela putorius furo | ENSMPUG00000016048 | 1 retrocopy | |
Mus musculus | ENSMUSG00000003039 | 2 retrocopies | |
Nomascus leucogenys | ENSNLEG00000005441 | 3 retrocopies | |
Otolemur garnettii | ENSOGAG00000027763 | 2 retrocopies | |
Pan troglodytes | ENSPTRG00000010641 | 4 retrocopies | |
Rattus norvegicus | ENSRNOG00000039528 | 1 retrocopy | |
Sus scrofa | ENSSSCG00000013855 | 2 retrocopies | |
Tarsius syrichta | ENSTSYG00000009106 | 1 retrocopy |
retro_tsyr_418 ,
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