RetrogeneDB ID: | retro_mluc_2487 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL430524:42948..43253(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | C15ORF40 | ||
Ensembl ID: | ENSMLUG00000007515 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 55.05 % |
Parental protein coverage: | 84.13 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 3 |
Parental | KGKSQSKEPEQALPPLGPVAVDAKGCVTIAIHAKPGAKHNAVTDLTTEAVSVAIAAPPSE-GEANAELC- |
K.K..SK.P...LP.LGP.AVD.KGCVT..IH...G.K.N.VT.LT....S.A.AAPP.E.GEA.AELC. | |
Retrocopy | KSKIESKKPAVPLPALGPAAVDPKGCVTV-IH---GSKQNDVTYLTAVPGSTAVAAPPLE>GEAKAELC< |
Parental | RYLSKVLELRKSDVVLDK-GSKSREKVVKLLASTTPEEV |
..LS.V..LRKS..VL......S.EKV.K.LAST...E. | |
Retrocopy | QCLSTVFGLRKSELVLGR<DGYSSEKVLKFLASTNSKEI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000016522 | 2 retrocopies | |
Canis familiaris | ENSCAFG00000013185 | 2 retrocopies | |
Callithrix jacchus | ENSCJAG00000015877 | 2 retrocopies | |
Equus caballus | ENSECAG00000022459 | 1 retrocopy | |
Homo sapiens | ENSG00000169609 | 1 retrocopy | |
Gorilla gorilla | ENSGGOG00000023062 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000009564 | 2 retrocopies | |
Myotis lucifugus | ENSMLUG00000007515 | 1 retrocopy |
retro_mluc_2487 ,
|
Macaca mulatta | ENSMMUG00000015890 | 1 retrocopy | |
Monodelphis domestica | ENSMODG00000019374 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000010930 | 1 retrocopy | |
Oryctolagus cuniculus | ENSOCUG00000005072 | 1 retrocopy | |
Procavia capensis | ENSPCAG00000016446 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000006737 | 1 retrocopy | |
Rattus norvegicus | ENSRNOG00000019514 | 2 retrocopies | |
Sorex araneus | ENSSARG00000006314 | 1 retrocopy | |
Sarcophilus harrisii | ENSSHAG00000017947 | 2 retrocopies | |
Sus scrofa | ENSSSCG00000030131 | 1 retrocopy | |
Tupaia belangeri | ENSTBEG00000014387 | 6 retrocopies |