Parental gene:

C15orf40, ENSG00000169609

Aliases:None
Description:chromosome 15 open reading frame 40 [Source:HGNC Symbol;Acc:28443]
Organism:Human (Homo sapiens)
Coordinates:15:83657192..83680393(-)


>ENSG00000169609
ATGCTGCGGCTCCGCAGCGGGCTGAGGCACCTTCGGGCAACACCCAATACTCGGGGCTCCGCTCGGCTTCTTTGCGCCGA
GATGCCTAAGAAGGCTGGTGCGACGACCAAGGGTAAAAGCCAGAGCAAGGAACCAGAGAGACCACTTCCTCCCTTAGGTC
CTGTGGCAGTTGATCCTAAAGGATGCGTCACCATAGCCATCCATGCAAAACCTGGCTCCAAACAAAATGCTGTAACAGAT
TTGACAGCAGAGGCTGTAAATGTAGCTATTGCAGCACCTCCATCAGAGGGAGAGGCTAATGCTGAGCTCTGTCGGTATCT
TTCCAAGGTCCTAGAACTCAGGAAGAGTGATGTGGTTTTGGATAAGACAGGATCTTGCTACATTGCCCAGGCTGGCCTCG
AACTCCTGGCTTCAAGTGATCTTCCCGCCTCGGCCTCCCAGAGTGCTGGGATAACAGGTGTGAGCCACCATACCCAACCA
GCTTTATTACTGATTTCCCTCTAA

Library Parental gene expression (RPM)
bodymap2_liver 4 .75 RPM
bodymap2_lung 5 .47 RPM
bodymap2_breast 8 .91 RPM
bodymap2_adipose 7 .45 RPM
bodymap2_adrenal 15 .15 RPM
bodymap2_skeletal_muscle 4 .26 RPM
bodymap2_thyroid 15 .86 RPM
bodymap2_prostate 10 .96 RPM
bodymap2_colon 5 .41 RPM
bodymap2_testis 11 .14 RPM
bodymap2_brain 8 .88 RPM
bodymap2_heart 3 .45 RPM
bodymap2_white_blood_cells 7 .17 RPM
bodymap2_lymph_node 8 .15 RPM
bodymap2_ovary 10 .85 RPM
bodymap2_kidney 10 .84 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016522 ortholog_one2one 2 retrogenes
retro_btau_1724, retro_btau_485,
Canis familiaris ENSCAFG00000013185 ortholog_one2many 2 retrogenes
retro_cfam_39, retro_cfam_420,
Callithrix jacchus ENSCJAG00000015877 ortholog_one2one 2 retrogenes
retro_cjac_1108, retro_cjac_4086,
Equus caballus ENSECAG00000022459 ortholog_one2many 1 retrogene
retro_ecab_374,
Gorilla gorilla ENSGGOG00000023062 ortholog_one2one 1 retrogene
retro_ggor_1378,
Microcebus murinus ENSMICG00000009564 ortholog_one2one 2 retrogenes
retro_mmur_1387, retro_mmur_1601,
Myotis lucifugus ENSMLUG00000007515 ortholog_one2one 1 retrogene
retro_mluc_2487,
Macaca mulatta ENSMMUG00000015890 ortholog_one2one 1 retrogene
retro_mmul_664,
Monodelphis domestica ENSMODG00000019374 ortholog_one2many 1 retrogene
retro_mdom_145,
Nomascus leucogenys ENSNLEG00000010930 ortholog_one2one 1 retrogene
retro_nleu_1803,
Oryctolagus cuniculus ENSOCUG00000005072 ortholog_one2many 1 retrogene
retro_ocun_211,
Procavia capensis ENSPCAG00000016446 ortholog_one2one 1 retrogene
retro_pcap_51,
Pongo abelii ENSPPYG00000006737 ortholog_one2one 1 retrogene
retro_pabe_1561,
Rattus norvegicus ENSRNOG00000019514 ortholog_one2one 2 retrogenes
retro_rnor_1547, retro_rnor_2334,
Sorex araneus ENSSARG00000006314 ortholog_one2one 1 retrogene
retro_sara_147,
Sarcophilus harrisii ENSSHAG00000017947 ortholog_one2one 2 retrogenes
retro_shar_233, retro_shar_442,
Sus scrofa ENSSSCG00000030131 ortholog_one2one 1 retrogene
retro_sscr_221,
Tupaia belangeri ENSTBEG00000014387 ortholog_one2one 6 retrogenes
retro_tbel_1151, retro_tbel_2000, retro_tbel_3071, retro_tbel_3546, retro_tbel_4182, retro_tbel_4371,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1881 76.43 99.35
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Download FASTA sequences of all ENSG00000169609 retrocopies