Parental gene:

C15orf40, ENSSHAG00000017947

Aliases:None
Description:chromosome 15 open reading frame 40 [Source:HGNC Symbol;Acc:28443]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834466.1:3120934..3132379(-)


>ENSSHAG00000017947
TTTCTTAATTATAGTAGTATTCTACTCATATTGATGAAAGATGTAGAATTGGGAAAAGGCCAGACTAAGGAGCCAGTGAA
ACCACTTCCTCCCACTGGACCTGTGGCAGTTGATCAAAATGGTTCTATCACAATAGCCATTCATGCCAAACCTGGCTCCA
AACAAAATGCCATAACAGATGTGACAACAGAAAATGTAAGTGTAGCTATTGCTGCACCTCCATCAGAAGGAGAAGCTAAT
GCAGAACTATGTCGGTATCTTTCCAAGGTCCTGGAACTTAGGAAGAGTGATGTTATCTTAGATAAGGGTGGTAAATCTCG
TGAAAAAGTGGTAAAGATTTTGGCATCCATAACTCCAGAAGAGATTTTGGAAAAATTGAAAAGGCAAGCAGAAGTCCCCT
AA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016522 ortholog_one2one 2 retrogenes
Canis familiaris ENSCAFG00000013185 ortholog_one2many 2 retrogenes
Callithrix jacchus ENSCJAG00000015877 ortholog_one2one 2 retrogenes
Equus caballus ENSECAG00000022459 ortholog_one2many 1 retrogene
Homo sapiens ENSG00000169609 ortholog_one2one 1 retrogene
Gorilla gorilla ENSGGOG00000023062 ortholog_one2one 1 retrogene
Microcebus murinus ENSMICG00000009564 ortholog_one2one 2 retrogenes
Myotis lucifugus ENSMLUG00000007515 ortholog_one2one 1 retrogene
Macaca mulatta ENSMMUG00000015890 ortholog_one2one 1 retrogene
Monodelphis domestica ENSMODG00000019374 ortholog_one2many 1 retrogene
Nomascus leucogenys ENSNLEG00000010930 ortholog_one2one 1 retrogene
Oryctolagus cuniculus ENSOCUG00000005072 ortholog_one2many 1 retrogene
Procavia capensis ENSPCAG00000016446 ortholog_one2one 1 retrogene
Pongo abelii ENSPPYG00000006737 ortholog_one2one 1 retrogene
Rattus norvegicus ENSRNOG00000019514 ortholog_one2one 2 retrogenes
Sorex araneus ENSSARG00000006314 ortholog_one2one 1 retrogene
Sus scrofa ENSSSCG00000030131 ortholog_one2one 1 retrogene
Tupaia belangeri ENSTBEG00000014387 ortholog_one2one 6 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_233 71.93 88.89
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2. retro_shar_442 62.93 88.89
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Download FASTA sequences of all ENSSHAG00000017947 retrocopies