RetrogeneDB ID: | retro_nleu_2573 | ||
Retrocopylocation | Organism: | Gibbon (Nomascus leucogenys) | |
Coordinates: | GL397374.1:245358..246165(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PHB | ||
Ensembl ID: | ENSNLEG00000002978 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.71 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MAAKVFESIGKFGLALAVAGGVVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCR |
MAAKVFESI.KFGLALAVAGGVVNSALYNVDAGHRAV.FDRF.GVQDIVVGEGTH.LIPWV.KPIIFDCR | |
Retrocopy | MAAKVFESISKFGLALAVAGGVVNSALYNVDAGHRAVVFDRFHGVQDIVVGEGTHCLIPWVRKPIIFDCR |
Parental | SRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELI |
S.PR.VPV.TGSKDLQNVNI.LRILFRP.ASQLPRIFTSIGEDYDERVL.SITT.ILKS.VA.FDAGELI | |
Retrocopy | SLPRKVPVTTGSKDLQNVNIMLRILFRPIASQLPRIFTSIGEDYDERVLLSITTNILKSAVACFDAGELI |
Parental | TQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA |
TQRELVSR.VS.DLTERAATFGLILDDVSLTHLTFGKEFTE.VEAKQVAQQE.ERARFVVEKAEQQ.K.A | |
Retrocopy | TQRELVSR*VSNDLTERAATFGLILDDVSLTHLTFGKEFTEVVEAKQVAQQEVERARFVVEKAEQQEKVA |
Parental | IISAEGDSKAAELIANSLATAGDGLIELRKLEAAEDIAYQLSRSRNITYLPAGQSVLLQLPQ |
IISAEGDSKAAELIANSLATAGDGLIE....EAAEDI.Y.LSRS.NITYLP.GQSVLLQLPQ | |
Retrocopy | IISAEGDSKAAELIANSLATAGDGLIE---QEAAEDITYLLSRSWNITYLPVGQSVLLQLPQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |