RetrogeneDB ID: | retro_ogar_577 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873523.1:35439386..35439692(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | LSM3 | ||
Ensembl ID: | ENSOGAG00000007659 | ||
Aliases: | None | ||
Description: | LSM3 homolog, U6 small nuclear RNA associated (S. cerevisiae) [Source:HGNC Symbol;Acc:17874] |
Percent Identity: | 92.16 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MADDVDQQQTTNTVEEPLDLIRLSLDERIYVKMRNDRELRGRLHAYDQHLNMILGDVEETVTTIEIDEET |
MADDVDQQQTTNTVEEPLDLIRLSLDE.IYVKMRND.EL.GRLHAYDQHLNMILGDVEETVTTIEIDEET | |
Retrocopy | MADDVDQQQTTNTVEEPLDLIRLSLDEQIYVKMRNDQELQGRLHAYDQHLNMILGDVEETVTTIEIDEET |
Parental | YEEIYKSTKRNIPMLFVRGDGVVLVAPPLRVG |
Y.EIYKSTK.NIPMLFV.G.G.VLVAPPLRVG | |
Retrocopy | YKEIYKSTKWNIPMLFV*GGGIVLVAPPLRVG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |