RetrogeneDB ID: | retro_ogar_604 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873524.1:39085971..39086427(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | COX5A | ||
Ensembl ID: | ENSOGAG00000005611 | ||
Aliases: | None | ||
Description: | cytochrome c oxidase subunit Va [Source:HGNC Symbol;Acc:2267] |
Percent Identity: | 82.24 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | MLGTALRRCAVAAASRAGPRGLLHPTPVP--GPTAAIQSIRCYSHGSHETDEEFDARWVTYFNKPDIDAW |
MLGTALR.CAV.....A.......PTPVP..GPTAAIQSI.CYSHGSHETDEEFDARWVT.FNKPDIDAW | |
Retrocopy | MLGTALRGCAVRSLPAALEASCIPPTPVPVPGPTAAIQSIGCYSHGSHETDEEFDARWVTHFNKPDIDAW |
Parental | ELRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGPHKEIYPYVIQELRPTLNELG |
ELRKGMNTLVGYDLVPEPKIIDAAL.ACRRLND..SAV.ILE.V..KAGP.KEIYPYV.QELRPTLNELG | |
Retrocopy | ELRKGMNTLVGYDLVPEPKIIDAALPACRRLNDLPSAVHILEGV*NKAGPQKEIYPYVMQELRPTLNELG |
Parental | ISTPEELGLDKV |
ISTPEELGLDK. | |
Retrocopy | ISTPEELGLDKM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |