RetrogeneDB ID: | retro_pvam_747 | ||
Retrocopylocation | Organism: | Megabat (Pteropus vampyrus) | |
Coordinates: | scaffold_10525:17402..17681(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL12 | ||
Ensembl ID: | ENSPVAG00000000925 | ||
Aliases: | None | ||
Description: | ribosomal protein L12 [Source:HGNC Symbol;Acc:10302] |
Percent Identity: | 69.89 % |
Parental protein coverage: | 56.36 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | TIQNRQAQIEVVPSASALIIKALKEPPRDRKKQKNIKHSGNITFDEIVNIARQMRHRSLARELSGTIKEI |
T....QAQIEVVPSAS.LIIKALK..PR.RKK....KH.GNITF.EI.N.A.QM.HRS..RELSGTIKEI | |
Retrocopy | TDHSGQAQIEVVPSASNLIIKALKRRPRNRKKXXXXKHNGNITFEEIDNTAQQMWHRSFPRELSGTIKEI |
Parental | LGTAQSVGCNVDGRHPHDIIDDI |
LGT.QSVGC.VDG.H.HD.I... | |
Retrocopy | LGTTQSVGCHVDGCHTHDDINSV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |