RetrogeneDB - Parental gene ENSGGOG00000000648 details

                            
>ENSGGOG00000000648
GCCTCTCGGCTTTCGGCTCGGAGGAGGCCAAGGTGCAACTTCCTTCGGTCGTCCCGAATCCGGGTTCATCCGACACCAGC

CGCCTCCACCATGCCGCCGAAGTTCGACCCCAACGAGATCAAAGTCGTATACCTGAGGTGCACCGGAGGTGAAGTCGGTG

CCACTTCTGCCCTGGCCCCCAAGATCGGCCCCCTGGGTCTGTCTCCAAAAAAGGTTGGTGATGACATTGCCAAGGCAACG

GGTGACTGGAAGGGCCTGAGGATTACAGTGAAACTGACCATTCAGAACAGACAGGCCCAGATTGAGGTGGTGCCTTCTGC

CTCTGCCCTGATCATCAAAGCCCTCAAGGAACCACCAAGAGACAGAAAGAAACAGAAAAACATTAAACACAGTGGGAATA

TCACTTTTGATGAGATCGTCAACATTGCTCGACAGATGCGGCACCGATCCTTAGCCAGAGAACTCTCTGGAACCATTAAA

GAGATCCTGGGGACTGCCCAGTCTGTGGGCTGTAATGTTGATGGCCGCCACCCTCATGACATCATCGATGACATCAACAG

TGGTGCTGTGGAATGCCCAGCCAGTTAA

Library	Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex	47 .14 RPM
SRP007412_cerebellum	50 .82 RPM
SRP007412_heart	35 .96 RPM
SRP007412_kidney	164 .33 RPM
SRP007412_liver	168 .45 RPM
SRP007412_testis	81 .53 RPM

Species	Parental gene accession	Homology type	Retrogenes number
Bos taurus	ENSBTAG00000006963	ortholog_one2one	3 retrogenes	retro_btau_102, retro_btau_2, retro_btau_5,
Callithrix jacchus	ENSCJAG00000018082	possible_ortholog	1 retrogene	retro_cjac_221,
Latimeria chalumnae	ENSLACG00000015373	ortholog_one2many	3 retrogenes	retro_lcha_31, retro_lcha_87, retro_lcha_92,
Macropus eugenii	ENSMEUG00000007380	possible_ortholog	12 retrogenes	retro_meug_1102, retro_meug_1107, retro_meug_1199, retro_meug_1357, retro_meug_1426, retro_meug_1611, retro_meug_1634, retro_meug_1691, retro_meug_1953, retro_meug_265, retro_meug_479, retro_meug_493,
Macaca mulatta	ENSMMUG00000000422	possible_ortholog	2 retrogenes	retro_mmul_1823, retro_mmul_53,
Monodelphis domestica	ENSMODG00000004571	possible_ortholog	9 retrogenes	retro_mdom_1061, retro_mdom_1177, retro_mdom_1192, retro_mdom_1526, retro_mdom_1719, retro_mdom_1871, retro_mdom_1947, retro_mdom_309, retro_mdom_925,
Mus musculus	ENSMUSG00000038900	ortholog_one2many	1 retrogene	retro_mmus_28,
Otolemur garnettii	ENSOGAG00000000597	possible_ortholog	120 retrogenes	retro_ogar_1002, retro_ogar_1010, retro_ogar_1049, retro_ogar_1069, retro_ogar_1106, retro_ogar_1117, retro_ogar_1137, retro_ogar_1140, retro_ogar_1181, retro_ogar_1188, retro_ogar_1189, retro_ogar_1192, retro_ogar_1230, retro_ogar_1247, retro_ogar_1263, retro_ogar_1295, retro_ogar_1331, retro_ogar_1341, retro_ogar_1408, retro_ogar_1409, retro_ogar_1427, retro_ogar_1457, retro_ogar_1464, retro_ogar_1489, retro_ogar_1503, retro_ogar_1534, retro_ogar_1536, retro_ogar_1550, retro_ogar_1569, retro_ogar_1570, retro_ogar_1579, retro_ogar_1606, retro_ogar_1621, retro_ogar_1709, retro_ogar_1717, retro_ogar_1739, retro_ogar_1789, retro_ogar_1803, retro_ogar_1810, retro_ogar_1825, retro_ogar_1836, retro_ogar_1881, retro_ogar_1885, retro_ogar_1916, retro_ogar_1923, retro_ogar_1937, retro_ogar_1941, retro_ogar_1948, retro_ogar_1969, retro_ogar_1975, retro_ogar_1987, retro_ogar_2055, retro_ogar_2115, retro_ogar_2134, retro_ogar_2172, retro_ogar_2179, retro_ogar_2180, retro_ogar_2208, retro_ogar_2209, retro_ogar_2230, retro_ogar_2291, retro_ogar_2323, retro_ogar_2387, retro_ogar_2483, retro_ogar_2495, retro_ogar_2511, retro_ogar_2570, retro_ogar_2620, retro_ogar_2622, retro_ogar_2624, retro_ogar_2749, retro_ogar_2768, retro_ogar_2809, retro_ogar_2904, retro_ogar_2935, retro_ogar_2945, retro_ogar_2953, retro_ogar_2980, retro_ogar_3004, retro_ogar_3017, retro_ogar_303, retro_ogar_3035, retro_ogar_3128, retro_ogar_3135, retro_ogar_3164, retro_ogar_3394, retro_ogar_3489, retro_ogar_395, retro_ogar_398, retro_ogar_412, retro_ogar_427, retro_ogar_452, retro_ogar_480, retro_ogar_512, retro_ogar_513, retro_ogar_538, retro_ogar_560, retro_ogar_587, retro_ogar_624, retro_ogar_636, retro_ogar_653, retro_ogar_655, retro_ogar_667, retro_ogar_668, retro_ogar_669, retro_ogar_683, retro_ogar_700, retro_ogar_734, retro_ogar_737, retro_ogar_744, retro_ogar_747, retro_ogar_775, retro_ogar_818, retro_ogar_853, retro_ogar_868, retro_ogar_901, retro_ogar_927, retro_ogar_956, retro_ogar_962, retro_ogar_964,
Pongo abelii	ENSPPYG00000019622	possible_ortholog	44 retrogenes	retro_pabe_1009, retro_pabe_1084, retro_pabe_1095, retro_pabe_1127, retro_pabe_1159, retro_pabe_1223, retro_pabe_1246, retro_pabe_1309, retro_pabe_1361, retro_pabe_1471, retro_pabe_1509, retro_pabe_1577, retro_pabe_1659, retro_pabe_1660, retro_pabe_1736, retro_pabe_1794, retro_pabe_1806, retro_pabe_1820, retro_pabe_1969, retro_pabe_1982, retro_pabe_2000, retro_pabe_2149, retro_pabe_2328, retro_pabe_2531, retro_pabe_2802, retro_pabe_2859, retro_pabe_2928, retro_pabe_2947, retro_pabe_3002, retro_pabe_3146, retro_pabe_3185, retro_pabe_3276, retro_pabe_3363, retro_pabe_3405, retro_pabe_3482, retro_pabe_3693, retro_pabe_488, retro_pabe_521, retro_pabe_604, retro_pabe_620, retro_pabe_757, retro_pabe_815, retro_pabe_831, retro_pabe_904,
Pan troglodytes	ENSPTRG00000022808	ortholog_one2many	1 retrogene	retro_ptro_21,
Pteropus vampyrus	ENSPVAG00000000925	ortholog_one2one	15 retrogenes	retro_pvam_100, retro_pvam_1026, retro_pvam_1193, retro_pvam_209, retro_pvam_239, retro_pvam_483, retro_pvam_572, retro_pvam_590, retro_pvam_617, retro_pvam_630, retro_pvam_687, retro_pvam_747, retro_pvam_787, retro_pvam_846, retro_pvam_888,
Rattus norvegicus	ENSRNOG00000016220	possible_ortholog	4 retrogenes	retro_rnor_166, retro_rnor_236, retro_rnor_247, retro_rnor_312,
Sarcophilus harrisii	ENSSHAG00000017864	possible_ortholog	8 retrogenes	retro_shar_140, retro_shar_266, retro_shar_284, retro_shar_335, retro_shar_346, retro_shar_453, retro_shar_508, retro_shar_646,
Sus scrofa	ENSSSCG00000005612	ortholog_one2one	14 retrogenes	retro_sscr_1111, retro_sscr_127, retro_sscr_189, retro_sscr_28, retro_sscr_439, retro_sscr_526, retro_sscr_551, retro_sscr_71, retro_sscr_715, retro_sscr_772, retro_sscr_773, retro_sscr_828, retro_sscr_832, retro_sscr_911,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_ggor_221	89.47	96.92	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_ggor_232	66.00	51.28	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_ggor_262	100.00	95.38	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_ggor_541	82.82	83.08	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_ggor_600	81.36	60.51	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_ggor_637	77.32	98.97	Please wait, loading	Please wait, loading	Please wait, loading
7.	retro_ggor_942	60.33	62.05	Please wait, loading	Please wait, loading	Please wait, loading
8.	retro_ggor_1024	75.97	66.15	Please wait, loading	Please wait, loading	Please wait, loading
9.	retro_ggor_1059	71.68	87.18	Please wait, loading	Please wait, loading	Please wait, loading
10.	retro_ggor_1086	94.80	88.72	Please wait, loading	Please wait, loading	Please wait, loading
11.	retro_ggor_1207	91.84	100.00	Please wait, loading	Please wait, loading	Please wait, loading
12.	retro_ggor_1242	64.12	85.13	Please wait, loading	Please wait, loading	Please wait, loading
13.	retro_ggor_1377	54.76	63.08	Please wait, loading	Please wait, loading	Please wait, loading
14.	retro_ggor_1389	64.58	95.38	Please wait, loading	Please wait, loading	Please wait, loading
15.	retro_ggor_1449	84.46	98.97	Please wait, loading	Please wait, loading	Please wait, loading
16.	retro_ggor_1511	80.00	98.46	Please wait, loading	Please wait, loading	Please wait, loading
17.	retro_ggor_1516	97.95	100.00	Please wait, loading	Please wait, loading	Please wait, loading
18.	retro_ggor_1530	94.33	99.49	Please wait, loading	Please wait, loading	Please wait, loading
19.	retro_ggor_1645	77.66	100.00	Please wait, loading	Please wait, loading	Please wait, loading
20.	retro_ggor_1740	93.33	100.00	Please wait, loading	Please wait, loading	Please wait, loading
21.	retro_ggor_1753	88.51	74.36	Please wait, loading	Please wait, loading	Please wait, loading
22.	retro_ggor_1806	84.46	98.97	Please wait, loading	Please wait, loading	Please wait, loading
23.	retro_ggor_1845	70.90	67.69	Please wait, loading	Please wait, loading	Please wait, loading
24.	retro_ggor_2158	91.19	98.46	Please wait, loading	Please wait, loading	Please wait, loading
25.	retro_ggor_2232	84.78	93.85	Please wait, loading	Please wait, loading	Please wait, loading
26.	retro_ggor_2293	87.86	71.28	Please wait, loading	Please wait, loading	Please wait, loading
27.	retro_ggor_2304	59.20	63.08	Please wait, loading	Please wait, loading	Please wait, loading
28.	retro_ggor_2334	89.06	98.46	Please wait, loading	Please wait, loading	Please wait, loading
29.	retro_ggor_2394	69.40	66.15	Please wait, loading	Please wait, loading	Please wait, loading
30.	retro_ggor_2414	93.30	99.49	Please wait, loading	Please wait, loading	Please wait, loading
31.	retro_ggor_2506	85.80	86.67	Please wait, loading	Please wait, loading	Please wait, loading
32.	retro_ggor_2758	57.76	59.49	Please wait, loading	Please wait, loading	Please wait, loading
33.	retro_ggor_2768	61.70	96.41	Please wait, loading	Please wait, loading	Please wait, loading
34.	retro_ggor_2949	74.49	97.44	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSGGOG00000000648 retrocopies

Parental gene:	RPL12, ENSGGOG00000000648
Aliases:	None
Description:	None
Organism:	*Gorilla (Gorilla gorilla)*
Coordinates:	9:110970021..110973749(-)

Parental gene:

RPL12, ENSGGOG00000000648