RetrogeneDB ID: | retro_tbel_1050 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | GeneScaffold_3700:17910..18188(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | BTF3L4 | ||
Ensembl ID: | ENSTBEG00000013307 | ||
Aliases: | None | ||
Description: | basic transcription factor 3-like 4 [Source:HGNC Symbol;Acc:30547] |
Percent Identity: | 59.38 % |
Parental protein coverage: | 60.13 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | GTVIHFNNP-KVQASLSANTFAITGHAEAKPITEMLPGILSQLGADSLTSLRKLAEQFPRQVLDSKAPKP |
G..I.FNNP.K.QAS..AN...ITG....K...EMLP.IL.QLGAD.LTSLR..AE..PR...D..AP.. | |
Retrocopy | GRAIRFNNP<KFQASPIANNLPITGRSF*KKMMEMLPSILNQLGADGLTSLRRPAEALPRHSVDGEAPLA |
Parental | EDIDEEDDDVPDLVENFDEASKNEAN |
....EE...VPDLVENFDEASKNEA. | |
Retrocopy | --AGEEEEEVPDLVENFDEASKNEAH |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |