RetrogeneDB ID: | retro_ttru_1204 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_107125:1505..2332(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HNRNPA2B1 | ||
Ensembl ID: | ENSTTRG00000000709 | ||
Aliases: | None | ||
Description: | heterogeneous nuclear ribonucleoprotein A2/B1 [Source:HGNC Symbol;Acc:5033] |
Percent Identity: | 89.89 % |
Parental protein coverage: | 66.83 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | PASKRSRGFGFVTFSSMAEVDAAMAAR-PHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTE |
PASKRSRGFGFVTFSSMAEVDAAMAAR..HSIDG.VVEPKRAVAREESGKPGAHVTVKKLFV.GIKEDTE | |
Retrocopy | PASKRSRGFGFVTFSSMAEVDAAMAAR<THSIDGKVVEPKRAVAREESGKPGAHVTVKKLFVCGIKEDTE |
Parental | EHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHTINGHNAEVRKALSRQEMQ |
EHHLRDYFEEYGKI...EIITDRQSGKKRGFGFVTFDDHDPVDK.VLQKYH.INGHNA.V.KALSRQEMQ | |
Retrocopy | EHHLRDYFEEYGKIYAVEIITDRQSGKKRGFGFVTFDDHDPVDKLVLQKYHPINGHNAKVKKALSRQEMQ |
Parental | EVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGDGYNGYGGGPGGGNFGGSPGYGG |
EVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFG.GYNGYGGGPGGGNFGGSPGYGG | |
Retrocopy | EVQSSRSGRGGNFGFGDSRGGGGNFGPGPGSNFRGGSDGYGSGRGFGVGYNGYGGGPGGGNFGGSPGYGG |
Parental | GRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNYNDFGNYNQQPSNYGPMKSGNFGGSRNMGGPY |
GRG.YGGGGPGYGNQGGG..GGYD............NDFGNYNQQPSNYGPMKSG.FGGSRNMGGPY | |
Retrocopy | GRGRYGGGGPGYGNQGGGCRGGYDKXXXXXXXXXXXNDFGNYNQQPSNYGPMKSGHFGGSRNMGGPY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |