RetrogeneDB ID: | retro_ttru_1272 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_109262:133120..133624(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | HPRT1 | ||
Ensembl ID: | ENSTTRG00000009954 | ||
Aliases: | None | ||
Description: | hypoxanthine phosphoribosyltransferase 1 [Source:HGNC Symbol;Acc:5157] |
Percent Identity: | 88.1 % |
Parental protein coverage: | 80.38 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | ISDDEPGYDLDLFCIPNHYAEDLEKVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLL |
IS...P.YDLDLFCIPNHYAEDLEKVFIPHGLIMDRTERLA.DV.KEMGGHH.VALCVL.G.YKFFA.LL | |
Retrocopy | ISNN*PAYDLDLFCIPNHYAEDLEKVFIPHGLIMDRTERLAQDVKKEMGGHHTVALCVLNGDYKFFAHLL |
Parental | DYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSL |
DYIK.L.RNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIG.DDLST.TGKNVLIVE.IIDTGKTM.TLLSL | |
Retrocopy | DYIKVLKRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGEDDLSTFTGKNVLIVEGIIDTGKTMKTLLSL |
Parental | VKQHNPKMVKVASLLVKRTPRSVGYRPD |
VKQHNPKM.KVASLLV.RTP.S.GYRPD | |
Retrocopy | VKQHNPKMIKVASLLVQRTP*SAGYRPD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |