RetrogeneDB ID: | retro_ttru_1472 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_114177:14390..14765(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PDCD5 | ||
Ensembl ID: | ENSTTRG00000003999 | ||
Aliases: | None | ||
Description: | programmed cell death 5 [Source:HGNC Symbol;Acc:8764] |
Percent Identity: | 91.34 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MAEEELEALRKHRV-AELQAKHGDPGDVAQQ-EAKQREAEMRNSILAQVLDQSARARLSNLALVKPEKTK |
MAEEELE.LRKH...AELQAKH.DPG.VAQ..EAKQREAEMRNS.LAQVLDQSARARLSNLALVKPEKTK | |
Retrocopy | MAEEELEVLRKHKA>AELQAKHRDPGHVAQR<EAKQREAEMRNSALAQVLDQSARARLSNLALVKPEKTK |
Parental | AVENYLIQMARYGQLSGKVSEQGLIEILEKVSQQTEKKTTVKFSRRKVMDSDEDDDY |
AVEN.LIQMARYGQLSGKVSEQGLIEILEKVSQQTEKKTTVKF.RRKVMDSDEDDDY | |
Retrocopy | AVENCLIQMARYGQLSGKVSEQGLIEILEKVSQQTEKKTTVKFNRRKVMDSDEDDDY |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |