RetrogeneDB ID: | retro_ttru_676 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | GeneScaffold_3057:305818..306358(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | NIP7 | ||
Ensembl ID: | ENSTTRG00000010012 | ||
Aliases: | None | ||
Description: | NIP7, nucleolar pre-rRNA processing protein [Source:HGNC Symbol;Acc:24328] |
Percent Identity: | 97.78 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MRPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKILKLAANISGDKLVSLGTCF |
M.PLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKIL.LAA.ISGDKLVSLGTCF | |
Retrocopy | MWPLTEEETRVMFEKIAKYIGENLQLLVDRPDGTYCFRLHNDRVYYVSEKILQLAASISGDKLVSLGTCF |
Parental | GKFTKTHKFRLHITALDYLAPYAKYKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIP |
GKFTKTHKFRLHITALDYLAPYAK.KVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIP | |
Retrocopy | GKFTKTHKFRLHITALDYLAPYAKCKVWIKPGAEQSFLYGNHVLKSGLGRITENTSQYQGVVVYSMADIP |
Parental | LGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT |
LGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT | |
Retrocopy | LGFGVAAKSTQDCRKVDPMAIVVFHQADIGEYVRHEETLT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |