Parental gene:

NUTF2, ENSCPOG00000003521

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_22:8786832..8792713(-)


>ENSCPOG00000003521
ATGGGAGACAAACCAATTTGGGAGCAGATTGGATCCAGCTTCATTCAACATTACTACCAGTTATTTGATAATGACAGAAC
CCAACTAGGCGCAATTTATATTGATGCATCATGCCTTACGTGGGAGGGGCAGCAGTTCCAGGGGAAAGCTGCCATTGTGG
AAAAATTGTCTAGCCTTCCGTTCCAGAAAATTCAGCACAGCATCACGGCACAGGACCATCAGCCTACACCAGATAGCTGC
ATCATCAGCATGGTTGTAGGCCAGCTCAAGGCTGATGAAGACCCCATCATGGGGTTCCACCAGATGTTCCTATTAAAGAA
CATCAACGATGCTTGGGTTTGCACCAATGATATGTTCAGGCTTGCTCTGCACAACTTCGGCTGA

Library Parental gene expression (RPM)
SRP017611_liver 9 .92 RPM
SRP017611_kidney 23 .14 RPM
SRP017611_brain 13 .98 RPM
SRP040447_lung 25 .67 RPM
SRP040447_skeletal_muscle 36 .33 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000017548 possible_ortholog 5 retrogenes
retro_amel_1225, retro_amel_134, retro_amel_1485, retro_amel_415, retro_amel_445,
Bos taurus ENSBTAG00000006414 ortholog_one2one 2 retrogenes
retro_btau_1573, retro_btau_881,
Erinaceus europaeus ENSEEUG00000003470 ortholog_one2one 2 retrogenes
retro_eeur_149, retro_eeur_571,
Gorilla gorilla ENSGGOG00000023925 possible_ortholog 5 retrogenes
retro_ggor_1032, retro_ggor_2152, retro_ggor_279, retro_ggor_2806, retro_ggor_3028,
Macropus eugenii ENSMEUG00000009874 ortholog_one2one 11 retrogenes
retro_meug_1023, retro_meug_136, retro_meug_1539, retro_meug_1585, retro_meug_1778, retro_meug_2140, retro_meug_253, retro_meug_282, retro_meug_352, retro_meug_676, retro_meug_748,
Myotis lucifugus ENSMLUG00000025175 possible_ortholog 3 retrogenes
retro_mluc_1265, retro_mluc_2194, retro_mluc_911,
Macaca mulatta ENSMMUG00000012038 possible_ortholog 6 retrogenes
retro_mmul_1160, retro_mmul_1270, retro_mmul_2127, retro_mmul_2169, retro_mmul_2593, retro_mmul_27,
Monodelphis domestica ENSMODG00000005517 ortholog_one2many 6 retrogenes
retro_mdom_1031, retro_mdom_1291, retro_mdom_1488, retro_mdom_1489, retro_mdom_1903, retro_mdom_37,
Mus musculus ENSMUSG00000008450 ortholog_one2many 1 retrogene
retro_mmus_232,
Oryctolagus cuniculus ENSOCUG00000006322 possible_ortholog 1 retrogene
retro_ocun_115,
Otolemur garnettii ENSOGAG00000015568 ortholog_one2one 2 retrogenes
retro_ogar_2713, retro_ogar_2811,
Rattus norvegicus ENSRNOG00000018945 ortholog_one2one 4 retrogenes
retro_rnor_1149, retro_rnor_1616, retro_rnor_2427, retro_rnor_545,
Sarcophilus harrisii ENSSHAG00000006100 ortholog_one2one 1 retrogene
retro_shar_274,
Sus scrofa ENSSSCG00000030295 ortholog_one2one 3 retrogenes
retro_sscr_1223, retro_sscr_710, retro_sscr_740,
Tupaia belangeri ENSTBEG00000011016 possible_ortholog 1 retrogene
retro_tbel_7,
Tursiops truncatus ENSTTRG00000009251 ortholog_one2one 2 retrogenes
retro_ttru_1534, retro_ttru_433,
Drosophila melanogaster FBgn0031145 ortholog_one2many 1 retrogene
retro_dmel_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_1368 63.38 55.12
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Download FASTA sequences of all ENSCPOG00000003521 retrocopies