Parental gene:

RPL9, ENSGGOG00000022799

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:4:39754909..39759781(-)


>ENSGGOG00000022799
ATGAAGACCATTCTCAGCAATCAGACTGTCGACATTCCAGAAAATGTCGACATTACTCTGAAGGGACGCACAGTTATCGT
GAAGGGCCCCAGAGGAACCCTGCGGAGGGACTTCAATCACATCAATGTAGAACTCAGTCTTCTTGGAAAGAAAAAAAAGA
GGCTCCGGGTTGACAAATGGTGGGGTAACAGAAAGGAACTGGCTACCGTTCGGACTATTTGTAGTCATGTACAGAACATG
ATCAAGGGTGTTACACTGGGCTTCCGTTACAAGATGAGGTCTGTGTATGCTCACTTCCCCATCAACGTTGTTATCCAGGA
GAATGGGTCTCTTGTTGAAATCCGAAATTTCTTGGGTGAAAAATACATCCGCAGGGTTCGGATGAGACCAGGTGTTGCTT
GTTCAGTATCTCAAGCCCAGAAAGATGAATTAATCCTTGAAGGAAATGACATTGAGCTTGTTTCAAATTCAGCGGCTTTG
ATTCAGCAAGCCACAACAGTTAAAAACAAGGATATCAGGAAATTTTTGGATGGTATCTATGTCTCTGAAAAAGGAACTGT
TCAGCAGGCTGATGAATAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 119 .21 RPM
SRP007412_cerebellum 174 .26 RPM
SRP007412_heart 65 .51 RPM
SRP007412_kidney 428 .68 RPM
SRP007412_liver 321 .05 RPM
SRP007412_testis 195 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007317 ortholog_one2many 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000003187 possible_ortholog 31 retrogenes
Bos taurus ENSBTAG00000014518 possible_ortholog 3 retrogenes
Canis familiaris ENSCAFG00000016008 ortholog_one2one 28 retrogenes
Callithrix jacchus ENSCJAG00000000723 ortholog_one2one 29 retrogenes
Danio rerio ENSDARG00000037350 ortholog_one2many 1 retrogene
Dasypus novemcinctus ENSDNOG00000007411 possible_ortholog 18 retrogenes
Equus caballus ENSECAG00000016489 ortholog_one2one 7 retrogenes
Erinaceus europaeus ENSEEUG00000004394 possible_ortholog 39 retrogenes
Felis catus ENSFCAG00000012284 ortholog_one2one 34 retrogenes
Homo sapiens ENSG00000163682 ortholog_one2one 28 retrogenes
Gadus morhua ENSGMOG00000001002 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000012021 possible_ortholog 38 retrogenes
Macropus eugenii ENSMEUG00000016722 ortholog_many2many 8 retrogenes
Microcebus murinus ENSMICG00000016778 ortholog_one2one 18 retrogenes
Myotis lucifugus ENSMLUG00000004597 possible_ortholog 34 retrogenes
Macaca mulatta ENSMMUG00000008553 possible_ortholog 22 retrogenes
Monodelphis domestica ENSMODG00000020553 ortholog_one2many 7 retrogenes
Nomascus leucogenys ENSNLEG00000017100 ortholog_one2one 26 retrogenes
Otolemur garnettii ENSOGAG00000004935 possible_ortholog 20 retrogenes
Pongo abelii ENSPPYG00000014675 ortholog_one2one 10 retrogenes
Pteropus vampyrus ENSPVAG00000000919 possible_ortholog 49 retrogenes
Sarcophilus harrisii ENSSHAG00000004918 ortholog_one2many 8 retrogenes
Sus scrofa ENSSSCG00000025192 ortholog_one2one 15 retrogenes
Tupaia belangeri ENSTBEG00000006042 possible_ortholog 18 retrogenes
Vicugna pacos ENSVPAG00000002023 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_219 79.79 100.00
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2. retro_ggor_347 71.19 61.46
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3. retro_ggor_392 52.55 70.31
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4. retro_ggor_577 88.72 69.27
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5. retro_ggor_641 67.74 64.06
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6. retro_ggor_660 79.41 70.83
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7. retro_ggor_1029 86.46 99.48
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8. retro_ggor_1084 78.87 100.00
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9. retro_ggor_1114 62.22 69.27
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10. retro_ggor_1180 85.62 82.81
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11. retro_ggor_1204 89.06 100.00
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12. retro_ggor_1286 79.59 100.00
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13. retro_ggor_1311 87.56 99.48
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14. retro_ggor_1328 79.59 100.00
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15. retro_ggor_1383 71.43 86.98
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16. retro_ggor_1476 91.15 100.00
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17. retro_ggor_1805 77.20 100.00
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18. retro_ggor_1854 64.29 50.52
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19. retro_ggor_1985 65.79 96.35
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20. retro_ggor_2148 75.61 63.54
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21. retro_ggor_2212 73.68 58.85
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22. retro_ggor_2260 73.61 73.96
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23. retro_ggor_2431 90.07 78.65
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24. retro_ggor_2498 65.90 87.50
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25. retro_ggor_2499 66.67 67.19
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26. retro_ggor_2700 71.74 94.27
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Download FASTA sequences of all ENSGGOG00000022799 retrocopies