Parental gene:

ENSTBEG00000006042

Aliases:None
Description:None
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_3816:461082..464399(-)


>ENSTBEG00000006042
ATGAAGACCATTCTCAGCAACCAGACGGTCGACATTCCCCAGAATGTCGACATCACCCTGAAGGGACGCACCGTCATCGT
GAAGGGCCCCCGAGGAACCCTGCGGAGGGACTTCAACCACATCAATGTCGAGCTCAGCCTCCTTGGGAAGAAGAAGAAGA
GGCTGCGGGTTGACAAATGGTGGGGAAACAGAAAGGAGCTGGCGACCGTTCGCACCATCTGTAGTCACGTCCAGAACATG
ATCAAGGGTGTTACGTTGGGCTTCCGCTACAAGATGAGGTCTGTGTACGCTCATTTCCCCATCAACGTCGTTATTCAGGA
GAATGGGTCTCTTGTTGAAATCCGAAATTTCTTGGGCGAAAAATACATCCGGAGAGTTCGAATGAGACCAGGTGTTGCTT
GTTCAGTATCTCAAGCCCAGAAAGATGAGTTGATCCTTGAAGGCAATGATATTGAACTTGTTTCAAATTCAGCTGCTTTG
ATACAGCAAGCCACCACAGTTAAAAATAAGGATATAAGAAAATTCTTGGATGGTATCTATGTCTCTGAGAAGGGTACAGT
TCAGCAGGCTGATGAGTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007317 ortholog_one2many 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000003187 possible_ortholog 31 retrogenes
Bos taurus ENSBTAG00000014518 possible_ortholog 3 retrogenes
Canis familiaris ENSCAFG00000016008 ortholog_one2many 28 retrogenes
Callithrix jacchus ENSCJAG00000000723 possible_ortholog 29 retrogenes
Danio rerio ENSDARG00000037350 ortholog_one2many 1 retrogene
Dasypus novemcinctus ENSDNOG00000007411 possible_ortholog 18 retrogenes
Equus caballus ENSECAG00000016489 ortholog_one2many 7 retrogenes
Erinaceus europaeus ENSEEUG00000004394 possible_ortholog 39 retrogenes
Felis catus ENSFCAG00000012284 ortholog_one2many 34 retrogenes
Homo sapiens ENSG00000163682 possible_ortholog 28 retrogenes
Gorilla gorilla ENSGGOG00000022799 possible_ortholog 26 retrogenes
Gadus morhua ENSGMOG00000001002 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000012021 ortholog_one2many 38 retrogenes
Macropus eugenii ENSMEUG00000016722 ortholog_many2many 8 retrogenes
Microcebus murinus ENSMICG00000016778 possible_ortholog 18 retrogenes
Myotis lucifugus ENSMLUG00000004597 possible_ortholog 34 retrogenes
Macaca mulatta ENSMMUG00000008553 ortholog_one2many 22 retrogenes
Monodelphis domestica ENSMODG00000020553 ortholog_one2many 7 retrogenes
Nomascus leucogenys ENSNLEG00000017100 possible_ortholog 26 retrogenes
Otolemur garnettii ENSOGAG00000004935 possible_ortholog 20 retrogenes
Procavia capensis ENSPCAG00000005834 possible_ortholog 22 retrogenes
Pongo abelii ENSPPYG00000014675 possible_ortholog 10 retrogenes
Pteropus vampyrus ENSPVAG00000000919 possible_ortholog 49 retrogenes
Sarcophilus harrisii ENSSHAG00000004918 ortholog_one2many 8 retrogenes
Sus scrofa ENSSSCG00000025192 ortholog_one2many 15 retrogenes
Tursiops truncatus ENSTTRG00000014289 possible_ortholog 13 retrogenes
Vicugna pacos ENSVPAG00000002023 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_18 94.79 100.00
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2. retro_tbel_28 94.79 100.00
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3. retro_tbel_30 98.44 100.00
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4. retro_tbel_44 96.35 100.00
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5. retro_tbel_142 91.24 100.00
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6. retro_tbel_325 86.01 100.00
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7. retro_tbel_340 87.32 73.44
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8. retro_tbel_995 66.02 53.12
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9. retro_tbel_1061 84.85 100.00
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10. retro_tbel_1761 84.00 65.10
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11. retro_tbel_1852 94.82 100.00
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12. retro_tbel_2152 85.28 100.00
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13. retro_tbel_2902 83.85 82.81
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14. retro_tbel_2937 80.16 65.10
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15. retro_tbel_3744 80.93 100.00
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16. retro_tbel_4288 75.26 100.00
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17. retro_tbel_4430 95.40 90.10
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18. retro_tbel_4492 90.78 73.44
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Download FASTA sequences of all ENSTBEG00000006042 retrocopies