Parental gene:

RPL9, ENSNLEG00000017100

Aliases:None
Description:None
Organism:Gibbon (Nomascus leucogenys)
Coordinates:GL397274.1:30686617..30691755(-)


>ENSNLEG00000017100
ATGAAGACCATTCTCAGCAATCAGACTGTCGACATTCCAGAAAATGTCGACATCACTCTGAAGGGACGCACAGTTATCGT
GAAGGGCCCCAGAGGAACCCTGCGGAGGGACTTCAATCACATCAATGTAGAACTCAGTCTTCTTGGAAAGAAAAAAAAGA
GGCTCCGGGTTGACAAATGGTGGGGTAACAGAAAGGAACTGGCTACCGTTCGGACCATTTGTAGTCATGTACAGAACATG
ATCAAGGGTGTTACACTGGGCTTCCGTTACAAGATGAGGTCTGTGTATGCTCACTTCCCCATCAACGTTGTTATCCAGGA
GAATGGGTCTCTTGTTGAAATCCGAAATTTCTTGGGTGAAAAATACATCCGCAGGGTTCGGATGAGACCAGGTGTTGCTT
GTTCAGTATCTCAAGCCCAGAAAGATGAATTAATCCTTGAAGGAAATGACATTGAGCTTGTTTCAAATTCAGCGGCTTTG
ATTCAGCAAGCCACAACAGTTAAAAACAAGGATATCAGGAAATTTTTGGATGGTATCTATGTCTCTGAAAAAGGAACTGT
TCAGCAGGCTGATGAATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007317 ortholog_one2one 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000003187 possible_ortholog 31 retrogenes
Bos taurus ENSBTAG00000014518 possible_ortholog 3 retrogenes
Canis familiaris ENSCAFG00000016008 ortholog_one2one 28 retrogenes
Callithrix jacchus ENSCJAG00000000723 ortholog_one2one 29 retrogenes
Danio rerio ENSDARG00000037350 ortholog_one2one 1 retrogene
Dasypus novemcinctus ENSDNOG00000007411 possible_ortholog 18 retrogenes
Equus caballus ENSECAG00000016489 ortholog_one2one 7 retrogenes
Erinaceus europaeus ENSEEUG00000004394 possible_ortholog 39 retrogenes
Felis catus ENSFCAG00000012284 ortholog_one2one 34 retrogenes
Homo sapiens ENSG00000163682 ortholog_one2one 28 retrogenes
Gorilla gorilla ENSGGOG00000022799 ortholog_one2one 26 retrogenes
Gadus morhua ENSGMOG00000001002 ortholog_one2one 1 retrogene
Loxodonta africana ENSLAFG00000012021 possible_ortholog 38 retrogenes
Macropus eugenii ENSMEUG00000016722 ortholog_one2many 8 retrogenes
Microcebus murinus ENSMICG00000016778 ortholog_one2one 18 retrogenes
Myotis lucifugus ENSMLUG00000004597 possible_ortholog 34 retrogenes
Macaca mulatta ENSMMUG00000008553 possible_ortholog 22 retrogenes
Monodelphis domestica ENSMODG00000020553 ortholog_one2one 7 retrogenes
Otolemur garnettii ENSOGAG00000004935 possible_ortholog 20 retrogenes
Pongo abelii ENSPPYG00000014675 ortholog_one2one 10 retrogenes
Sarcophilus harrisii ENSSHAG00000004918 ortholog_one2one 8 retrogenes
Sus scrofa ENSSSCG00000025192 ortholog_one2one 15 retrogenes
Tupaia belangeri ENSTBEG00000006042 possible_ortholog 18 retrogenes
Vicugna pacos ENSVPAG00000002023 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_nleu_174 67.63 87.50
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2. retro_nleu_367 86.26 68.23
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3. retro_nleu_400 67.20 62.50
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4. retro_nleu_410 79.27 100.00
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5. retro_nleu_610 65.91 89.58
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6. retro_nleu_660 70.26 100.00
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7. retro_nleu_707 67.43 89.58
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8. retro_nleu_755 74.05 67.19
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9. retro_nleu_806 94.79 100.00
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10. retro_nleu_1308 72.73 100.00
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11. retro_nleu_1400 85.94 99.48
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12. retro_nleu_1417 78.24 100.00
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13. retro_nleu_1469 68.05 86.98
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14. retro_nleu_1700 73.68 58.85
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15. retro_nleu_1723 84.91 55.21
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16. retro_nleu_1764 72.88 61.46
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17. retro_nleu_1829 78.57 92.71
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18. retro_nleu_2064 56.57 51.56
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19. retro_nleu_2072 83.19 61.46
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20. retro_nleu_2223 89.47 69.27
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21. retro_nleu_2490 80.41 100.00
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22. retro_nleu_2568 90.10 100.00
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23. retro_nleu_2634 85.71 54.69
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24. retro_nleu_2718 72.03 73.96
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25. retro_nleu_2799 66.67 63.54
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26. retro_nleu_2832 82.24 78.65
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Download FASTA sequences of all ENSNLEG00000017100 retrocopies