Parental gene:

ENSOGAG00000004935

Aliases:None
Description:None
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873700.1:596548..602251(-)


>ENSOGAG00000004935
ATGAAGACCATTCTCAGCAATCAAACTGTCGACATTCCAGAAAATGTCGACATCACTCTGAAGGGACGCACAGTTATTGT
GAAGGGTCCCAGAGGAACCCTGCGGAGGGACTTCAACCACATCAATGTGGAACTCAGTCTCCTTGGAAAGAAAAAGAAGA
GGCTCCGGGTTGACAAATGGTGGGGAAATAGAAAGGAACTGGCTACTGTTCGCACTATTTGTAGTCACGTACAGAATATG
ATCAAGGGTGTTACACTGGGCTTCCGTTACAAGATGAGGTCTGTGTATGCTCACTTCCCCATCAACGTTGTTATCCAGGA
GAATGGGTCTCTTGTTGAAATAAGAAATTTCTTGGGTGAAAAATATATCCGCCGGGTTCGGATGAGGGCAGGTGTTGCCT
GTTCAGTATCTCAAGCCCAGAAAGATGAGTTAATCCTCGAAGGAAATGACATTGAGCTTGTTTCAAATTCAGCTGCTTTG
ATTCAGCAGGCCACAACAGTTAAAAACAAGGATATCAGAAAATTTTTGGATGGTATTTATGTCTCTGAAAAAGGAACAGT
TCAGCAGGCTGATGAGTAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000007317 ortholog_one2many 1 retrogene
Ailuropoda melanoleuca ENSAMEG00000003187 possible_ortholog 31 retrogenes
Bos taurus ENSBTAG00000014518 possible_ortholog 3 retrogenes
Canis familiaris ENSCAFG00000016008 possible_ortholog 28 retrogenes
Callithrix jacchus ENSCJAG00000000723 possible_ortholog 29 retrogenes
Cavia porcellus ENSCPOG00000004543 possible_ortholog 15 retrogenes
Danio rerio ENSDARG00000037350 ortholog_one2many 1 retrogene
Dasypus novemcinctus ENSDNOG00000007411 possible_ortholog 18 retrogenes
Dipodomys ordii ENSDORG00000001088 possible_ortholog 6 retrogenes
Equus caballus ENSECAG00000016489 possible_ortholog 7 retrogenes
Erinaceus europaeus ENSEEUG00000004394 possible_ortholog 39 retrogenes
Felis catus ENSFCAG00000012284 possible_ortholog 34 retrogenes
Homo sapiens ENSG00000163682 possible_ortholog 28 retrogenes
Gorilla gorilla ENSGGOG00000022799 possible_ortholog 26 retrogenes
Gadus morhua ENSGMOG00000001002 ortholog_one2many 1 retrogene
Loxodonta africana ENSLAFG00000012021 possible_ortholog 38 retrogenes
Macropus eugenii ENSMEUG00000016722 ortholog_many2many 8 retrogenes
Microcebus murinus ENSMICG00000016778 possible_ortholog 18 retrogenes
Myotis lucifugus ENSMLUG00000004597 ortholog_one2many 34 retrogenes
Macaca mulatta ENSMMUG00000008553 possible_ortholog 22 retrogenes
Monodelphis domestica ENSMODG00000020553 ortholog_one2many 7 retrogenes
Mus musculus ENSMUSG00000047215 possible_ortholog 2 retrogenes
Nomascus leucogenys ENSNLEG00000017100 possible_ortholog 26 retrogenes
Procavia capensis ENSPCAG00000005834 possible_ortholog 22 retrogenes
Pongo abelii ENSPPYG00000014675 possible_ortholog 10 retrogenes
Pteropus vampyrus ENSPVAG00000000919 ortholog_one2many 49 retrogenes
Rattus norvegicus ENSRNOG00000026716 possible_ortholog 3 retrogenes
Sarcophilus harrisii ENSSHAG00000004918 ortholog_one2many 8 retrogenes
Sus scrofa ENSSSCG00000025192 possible_ortholog 15 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000002077 possible_ortholog 13 retrogenes
Tupaia belangeri ENSTBEG00000006042 possible_ortholog 18 retrogenes
Tursiops truncatus ENSTTRG00000014289 possible_ortholog 13 retrogenes
Vicugna pacos ENSVPAG00000002023 possible_ortholog 1 retrogene

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_117 93.23 100.00
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2. retro_ogar_329 88.03 73.44
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3. retro_ogar_429 81.62 70.31
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4. retro_ogar_864 73.85 100.00
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5. retro_ogar_886 77.27 79.69
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6. retro_ogar_963 92.23 100.00
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7. retro_ogar_1223 96.89 100.00
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8. retro_ogar_1471 78.45 58.85
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9. retro_ogar_1614 77.78 55.73
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10. retro_ogar_1694 64.49 70.31
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11. retro_ogar_1807 74.71 87.50
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12. retro_ogar_1884 80.15 70.31
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13. retro_ogar_1906 71.25 81.25
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14. retro_ogar_1933 64.93 69.79
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15. retro_ogar_2162 91.21 94.27
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16. retro_ogar_2173 63.30 56.25
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17. retro_ogar_2806 93.21 83.85
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18. retro_ogar_3036 98.82 88.02
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19. retro_ogar_3115 82.61 95.31
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20. retro_ogar_3276 74.16 92.71
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Download FASTA sequences of all ENSOGAG00000004935 retrocopies