Parental gene:

Gabarap, ENSMUSG00000018567

Aliases:None
Description:gamma-aminobutyric acid receptor associated protein [Source:MGI Symbol;Acc:MGI:1861742]
Organism:Mouse (Mus musculus)
Coordinates:11:69991142..69994951(+)


>ENSMUSG00000018567
ATGAAGTTCGTGTACAAAGAGGAGCATCCGTTCGAGAAGCGCCGCTCTGAGGGCGAGAAAATCCGAAAGAAATACCCAGA
CCGGGTCCCGGTGATAGTGGAAAAAGCCCCCAAAGCTCGGATAGGAGACCTGGACAAAAAGAAATACCTGGTGCCTTCTG
ATCTTACAGTTGGTCAATTCTACTTCTTGATCCGGAAGCGAATTCATCTCCGTGCTGAAGATGCCTTGTTTTTCTTTGTC
AACAATGTCATTCCACCCACCAGTGCCACGATGGGTCAGCTGTACCAGGAACACCATGAAGAAGACTTCTTTCTATACAT
TGCCTACAGTGATGAAAGCGTCTATGGTCTGTGA

Library Parental gene expression (RPM)
SRP007412_brain 82 .75 RPM
SRP007412_cerebellum 74 .81 RPM
SRP007412_heart 127 .76 RPM
SRP007412_kidney 172 .73 RPM
SRP007412_liver 129 .61 RPM
SRP007412_testis 178 .15 RPM



Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000012473 ortholog_one2one 1 retrogene
retro_cint_25,
Callithrix jacchus ENSCJAG00000016655 ortholog_one2one 2 retrogenes
retro_cjac_2851, retro_cjac_3820,
Gorilla gorilla ENSGGOG00000013770 ortholog_one2one 1 retrogene
retro_ggor_821,
Loxodonta africana ENSLAFG00000000744 possible_ortholog 1 retrogene
retro_lafr_61,
Macaca mulatta ENSMMUG00000010545 ortholog_one2many 1 retrogene
retro_mmul_155,
Mus musculus ENSMUSG00000031812 within_species_paralog 4 retrogenes
retro_mmus_1271, retro_mmus_2384, retro_mmus_2619, retro_mmus_846,
Mus musculus ENSMUSG00000031950 within_species_paralog 5 retrogenes
retro_mmus_2637, retro_mmus_2655, retro_mmus_3240, retro_mmus_456, retro_mmus_506,
Nomascus leucogenys ENSNLEG00000008049 ortholog_one2one 2 retrogenes
retro_nleu_1670, retro_nleu_4,
Oryctolagus cuniculus ENSOCUG00000006997 ortholog_one2one 1 retrogene
retro_ocun_311,
Pongo abelii ENSPPYG00000007901 ortholog_one2one 1 retrogene
retro_pabe_122,
Pan troglodytes ENSPTRG00000034115 ortholog_one2one 1 retrogene
retro_ptro_60,
Rattus norvegicus ENSRNOG00000017417 ortholog_one2one 2 retrogenes
retro_rnor_1818, retro_rnor_2093,
Sus scrofa ENSSSCG00000017936 possible_ortholog 1 retrogene
retro_sscr_163,
Drosophila melanogaster FBgn0052672 ortholog_one2many 1 retrogene
retro_dmel_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3107 81.05 81.20
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Download FASTA sequences of all ENSMUSG00000018567 retrocopies