Parental gene:

GABARAP, ENSOCUG00000006997

Aliases:None
Description:GABA(A) receptor-associated protein (GABARAP), mRNA [Source:RefSeq mRNA;Acc:NM_001082142]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:19:11899266..11901106(+)


>ENSOCUG00000006997
ATGAAGTTCGTGTACAAGGAGGAGCATCCGTTCGAGAAGCGCCGCTCTGAGGGCGAGAAGATCAGAAAGAAATACCCGGA
CCGGGTCCCGGTGATAGTAGAAAAGGCTCCCAAAGCTCGGATAGGAGACCTGGACAAAAAAAAATACCTGGTGCCTTCTG
ATCTCACAGTCGGTCAGTTCTACTTCCTGATCCGGAAGCGAATTCATCTCCGAGCTGAGGATGCCTTGTTTTTCTTTGTC
AACAACGTCATTCCACCCACCAGTGCCACCATGGGTCAGCTCTACCAGGAGCACCACGAAGAGGACTTCTTTCTGTACAT
TGCCTACAGTGACGAAAGTGTCTACGGCCTGTGA

Library Parental gene expression (RPM)
SRP017611_brain 180 .74 RPM
SRP017611_kidney 317 .96 RPM
SRP017611_liver 108 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Ciona intestinalis ENSCING00000012473 ortholog_one2one 1 retrogene
retro_cint_25,
Callithrix jacchus ENSCJAG00000016655 ortholog_one2one 2 retrogenes
retro_cjac_2851, retro_cjac_3820,
Gorilla gorilla ENSGGOG00000013770 ortholog_one2one 1 retrogene
retro_ggor_821,
Loxodonta africana ENSLAFG00000000744 possible_ortholog 1 retrogene
retro_lafr_61,
Macaca mulatta ENSMMUG00000010545 ortholog_one2many 1 retrogene
retro_mmul_155,
Mus musculus ENSMUSG00000018567 ortholog_one2one 1 retrogene
retro_mmus_3107,
Nomascus leucogenys ENSNLEG00000008049 ortholog_one2one 2 retrogenes
retro_nleu_1670, retro_nleu_4,
Oryctolagus cuniculus ENSOCUG00000016834 within_species_paralog 3 retrogenes
retro_ocun_1380, retro_ocun_496, retro_ocun_697,
Oryctolagus cuniculus ENSOCUG00000022970 within_species_paralog 4 retrogenes
retro_ocun_1155, retro_ocun_572, retro_ocun_731, retro_ocun_784,
Pongo abelii ENSPPYG00000007901 ortholog_one2one 1 retrogene
retro_pabe_122,
Pan troglodytes ENSPTRG00000034115 ortholog_one2one 1 retrogene
retro_ptro_60,
Rattus norvegicus ENSRNOG00000017417 ortholog_one2one 2 retrogenes
retro_rnor_1818, retro_rnor_2093,
Sus scrofa ENSSSCG00000017936 possible_ortholog 1 retrogene
retro_sscr_163,
Drosophila melanogaster FBgn0052672 ortholog_one2many 1 retrogene
retro_dmel_23,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_311 97.44 100.00
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Download FASTA sequences of all ENSOCUG00000006997 retrocopies