Parental gene:

MMU.9740, ENSMMUG00000006492

Aliases:None
Description:actin-related protein 2/3 complex subunit 3 [Source:RefSeq peptide;Acc:NP_001247695]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:11:111364754..111380695(-)


>ENSMMUG00000006492
ATGCCGGCTTACCACTCTTCTCTCATGGATCCTGACACCAAACTCATCGGAAACATGGCACTGTTACCTATTAGAAGTCA
ATTCAAAGGACCTGCACCCAGAGAGACAAAAGATACAGATATTGTGGATGAAGCCATCTATTACTTCAAGGCCAATGTCT
TCTTCAAAAACTATGAAATTAAGAATGAAGCTGATAGGACCTTGATATATATAACTCTCTATATTTCTGAATGTCTGAAG
AAACTCCAAAAGTGCAATTCCAAAAGCCAAGGTGAGAAAGAAATGTATACATTGGGAATCACTAATTTTCCCATTCCTGG
AGAGCCTGGTTTTCCACTTAACGCAATTTATGCCAAACCTGCAAACAAACAGGAAGATGAAGTGATGAGAGCCTATTTAC
AACAGCTAAGGCAAGAGACTGGACTGAGACTTTGTGAGAAAGTTTTTGACCCTCAGAATGATAAACCTAGCAAGTGGTGG
ACTTGCTTTGTGAAGAGACAGTTCATGAACAAGAGTCTTTCAGGACCTGGACAGTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 50 .22 RPM
SRP007412_brain 45 .38 RPM
SRP007412_cerebellum 27 .77 RPM
SRP007412_heart 17 .08 RPM
SRP007412_kidney 36 .15 RPM
SRP007412_liver 17 .22 RPM
SRP007412_testis 11 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008456 possible_ortholog 1 retrogene
retro_cfam_11,
Callithrix jacchus ENSCJAG00000009360 ortholog_one2many 1 retrogene
retro_cjac_242,
Dasypus novemcinctus ENSDNOG00000004987 possible_ortholog 2 retrogenes
retro_dnov_2619, retro_dnov_685,
Dipodomys ordii ENSDORG00000008212 possible_ortholog 1 retrogene
retro_dord_312,
Erinaceus europaeus ENSEEUG00000011531 possible_ortholog 2 retrogenes
retro_eeur_122, retro_eeur_99,
Echinops telfairi ENSETEG00000006992 ortholog_one2one 2 retrogenes
retro_etel_116, retro_etel_1323,
Felis catus ENSFCAG00000004132 possible_ortholog 2 retrogenes
retro_fcat_1048, retro_fcat_73,
Loxodonta africana ENSLAFG00000006166 possible_ortholog 3 retrogenes
retro_lafr_1119, retro_lafr_763, retro_lafr_840,
Microcebus murinus ENSMICG00000005485 ortholog_one2one 2 retrogenes
retro_mmur_1009, retro_mmur_1507,
Monodelphis domestica ENSMODG00000011628 ortholog_many2many 1 retrogene
retro_mdom_71,
Mustela putorius furo ENSMPUG00000002151 ortholog_one2one 2 retrogenes
retro_mputfur_1346, retro_mputfur_1540,
Nomascus leucogenys ENSNLEG00000002802 possible_ortholog 4 retrogenes
retro_nleu_239, retro_nleu_283, retro_nleu_3078, retro_nleu_389,
Oryctolagus cuniculus ENSOCUG00000011908 possible_ortholog 1 retrogene
retro_ocun_1252,
Otolemur garnettii ENSOGAG00000013424 possible_ortholog 1 retrogene
retro_ogar_2855,
Oreochromis niloticus ENSONIG00000003785 ortholog_many2many 1 retrogene
retro_onil_18,
Procavia capensis ENSPCAG00000011858 possible_ortholog 2 retrogenes
retro_pcap_421, retro_pcap_441,
Pongo abelii ENSPPYG00000004947 possible_ortholog 6 retrogenes
retro_pabe_1735, retro_pabe_1790, retro_pabe_2838, retro_pabe_376, retro_pabe_769, retro_pabe_792,
Sarcophilus harrisii ENSSHAG00000014805 ortholog_one2many 3 retrogenes
retro_shar_144, retro_shar_439, retro_shar_576,
Sus scrofa ENSSSCG00000009821 ortholog_one2one 1 retrogene
retro_sscr_177,
Tupaia belangeri ENSTBEG00000011219 possible_ortholog 1 retrogene
retro_tbel_2268,
Tarsius syrichta ENSTSYG00000002953 possible_ortholog 4 retrogenes
retro_tsyr_1150, retro_tsyr_1341, retro_tsyr_2103, retro_tsyr_794,
Tursiops truncatus ENSTTRG00000015083 possible_ortholog 2 retrogenes
retro_ttru_713, retro_ttru_880,
Vicugna pacos ENSVPAG00000008404 possible_ortholog 1 retrogene
retro_vpac_225,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_543 88.89 80.90
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_1105 89.33 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmul_1174 97.75 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSMMUG00000006492 retrocopies