Parental gene:

ATP5G1, ENSSSCG00000017544

Aliases:None
Description:ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C1 (subunit 9) [Source:HGNC Symbol;Acc:841]
Organism:Pig (Sus scrofa)
Coordinates:12:25066818..25069489(+)


>ENSSSCG00000017544
ATGCAAACCACCGGGGCGCTACTCATTTCTCCTGCTCTGCTCCGCTCTTGTACCAGGGGCCTGATCAGGCCTGTGTCTGC
CTCCTTCCTGAGTAGGCCAGAAATCCCATCTGAACAGCCGCCCTGCAGCAGTGTCCCACTCCAGGTGGCCAGGCGGGAGT
TCCAGACCAGTGTTGTCTCCCGGGACATTGACACAGCGGCCAAGTTTATTGGTGCTGGGGCCGCCACAGTTGGTGTGGCT
GGTTCCGGGGCTGGCATTGGAACAGTGTTTGGCAGCTTGATCATTGGCTATGCCAGGAACCCATCTCTGAAGCAGCAGCT
CTTCTCCTATGCCATTCTGGGCTTTGCCCTGTCTGAGGCCATGGGGCTCTTCTGTTTGATGGTCGCCTTCCTTATCCTCT
TCGCCATGTGA

Library Parental gene expression (RPM)
SRP014902_placenta 47 .92 RPM
SRP014902_testis 42 .58 RPM
SRP018288_heart 338 .87 RPM
SRP018288_kidney 154 .95 RPM
SRP018288_liver 74 .68 RPM
SRP018288_lung 15 .78 RPM
SRP018856_adipose 61 .78 RPM
SRP035408_brain 27 .79 RPM
SRP035408_liver 17 .79 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000006341 ortholog_one2many 1 retrogene
retro_acar_9,
Bos taurus ENSBTAG00000018339 ortholog_one2one 3 retrogenes
retro_btau_1506, retro_btau_423, retro_btau_431,
Callithrix jacchus ENSCJAG00000007352 possible_ortholog 7 retrogenes
retro_cjac_1190, retro_cjac_1549, retro_cjac_161, retro_cjac_1878, retro_cjac_289, retro_cjac_4060, retro_cjac_679,
Cavia porcellus ENSCPOG00000009017 ortholog_one2many 2 retrogenes
retro_cpor_43, retro_cpor_550,
Macropus eugenii ENSMEUG00000005744 ortholog_one2one 2 retrogenes
retro_meug_1650, retro_meug_1973,
Macaca mulatta ENSMMUG00000013395 possible_ortholog 1 retrogene
retro_mmul_173,
Oryctolagus cuniculus ENSOCUG00000016225 ortholog_one2one 2 retrogenes
retro_ocun_346, retro_ocun_375,
Otolemur garnettii ENSOGAG00000011713 ortholog_one2one 3 retrogenes
retro_ogar_1847, retro_ogar_2767, retro_ogar_531,
Rattus norvegicus ENSRNOG00000007235 possible_ortholog 5 retrogenes
retro_rnor_1342, retro_rnor_2240, retro_rnor_529, retro_rnor_64, retro_rnor_880,
Tursiops truncatus ENSTTRG00000008526 ortholog_one2one 1 retrogene
retro_ttru_279,
Vicugna pacos ENSVPAG00000007653 ortholog_one2one 1 retrogene
retro_vpac_282,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_348 96.32 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSSCG00000017544 retrocopies