Parental gene:

ATP5G1, ENSBTAG00000018339

Aliases:None
Description:ATP synthase lipid-binding protein, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:P32876]
Organism:Cow (Bos taurus)
Coordinates:19:38253560..38255681(-)


>ENSBTAG00000018339
ATGCAGACCACCGGGGCACTACTCATTTCTCCTGCTCTGATCCGTTCTTGTACCAGGGGTCTGATCAGGCCTGTGTCTGC
CTCCTTCCTGAGTAGGCCAGAGATCCAATCTGTACAGCCTTCCTACAGCAGTGGCCCACTGCAGGTGGCCCGGCGGGAAT
TCCAGACCAGTGTTGTCTCCCGGGACATTGACACAGCGGCCAAGTTTATTGGCGCTGGGGCTGCCACAGTTGGTGTGGCG
GGTTCAGGGGCTGGTATTGGAACAGTGTTTGGCAGCTTGATCATTGGCTATGCCAGGAACCCGTCTCTGAAGCAGCAGCT
CTTCTCCTATGCCATTCTGGGCTTTGCCCTGTCTGAGGCTATGGGGCTCTTCTGTTTGATGGTCGCCTTCCTCATCCTCT
TCGCCATGTGA

Library Parental gene expression (RPM)
SRP017611_brain 42 .66 RPM
SRP017611_kidney 160 .21 RPM
SRP017611_liver 63 .13 RPM
ERP005899_muscle 148 .50 RPM
ERP005899_liver 31 .65 RPM
SRP030211_testis 22 .09 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000006341 ortholog_one2many 1 retrogene
retro_acar_9,
Bos taurus ENSBTAG00000002944 within_species_paralog 1 retrogene
retro_btau_838,
Bos taurus ENSBTAG00000005735 within_species_paralog 11 retrogenes
retro_btau_1405, retro_btau_1414, retro_btau_733, retro_btau_734, retro_btau_735, retro_btau_737, retro_btau_739, retro_btau_740, retro_btau_741, retro_btau_742, retro_btau_994,
Callithrix jacchus ENSCJAG00000007352 possible_ortholog 7 retrogenes
retro_cjac_1190, retro_cjac_1549, retro_cjac_161, retro_cjac_1878, retro_cjac_289, retro_cjac_4060, retro_cjac_679,
Cavia porcellus ENSCPOG00000009017 ortholog_one2many 2 retrogenes
retro_cpor_43, retro_cpor_550,
Macropus eugenii ENSMEUG00000005744 ortholog_one2one 2 retrogenes
retro_meug_1650, retro_meug_1973,
Macaca mulatta ENSMMUG00000013395 possible_ortholog 1 retrogene
retro_mmul_173,
Oryctolagus cuniculus ENSOCUG00000016225 ortholog_one2one 2 retrogenes
retro_ocun_346, retro_ocun_375,
Otolemur garnettii ENSOGAG00000011713 ortholog_one2one 3 retrogenes
retro_ogar_1847, retro_ogar_2767, retro_ogar_531,
Rattus norvegicus ENSRNOG00000007235 possible_ortholog 5 retrogenes
retro_rnor_1342, retro_rnor_2240, retro_rnor_529, retro_rnor_64, retro_rnor_880,
Sus scrofa ENSSSCG00000017544 ortholog_one2one 1 retrogene
retro_sscr_348,
Tursiops truncatus ENSTTRG00000008526 ortholog_one2one 1 retrogene
retro_ttru_279,
Vicugna pacos ENSVPAG00000007653 ortholog_one2one 1 retrogene
retro_vpac_282,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_423 75.56 98.53
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2. retro_btau_431 81.08 80.88
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3. retro_btau_1506 73.33 87.50
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Download FASTA sequences of all ENSBTAG00000018339 retrocopies