Parental gene:

ENSSTOG00000008517

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393280.1:5267708..5289707(-)


>ENSSTOG00000008517
TCCTCCAAGCGGGTCCCCTCCCCACAGCACCACGGCTTCTTTTCCTCAGCAAGGCGACGCGCGCCCCCCGCCGCCCCGCG
CACGCCCCGACGACCCCACCCCGCGCCCGCCTGGCCCGCCACTGGGGCGCCGCGCCCCGCAAAAATTTCACTCCATCTTA
TTACTTGTTTTTCTTTTTATACACACGTTTCCCTCCAAAGATGGTGTGTTATCTTAACAGATGCAGTTTATAAAAAGATC
ACAAGAGAACTTGTTCAAACCGTTTTAGCACGGAAACCTAAAATGTGCAGCTTCCTTGAGTGGCGAGATCTGAAGATTGT
TTATAAAAGATATGCTAGTCTGTATTTTTGCTGCGCTATTGAGGATCAGGACAATGAACTAATTACCCTGGAAATAATTC
ATCGTTATGTGGAATTACTTGACAAGTATTTTGGCAGTGTGTGTGAACTTGATATCATCTTTAATTTTGAGAAGGCTTAT
TTTATTTTGGATGAGTTTCTTTTGGGAGGGGAAGTTCAGGAAACATCCAAGAAAAATGTCCTTAAAGCAATTGAGCAGGC
TGATCTACTACAGGAGAAAACAGAGACTATGTATCACAGCAAGAGTTTCATTGGGTGTAAGAAAGCGTACTAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020420 ortholog_one2many 1 retrogene
retro_btau_1308,
Callithrix jacchus ENSCJAG00000004393 possible_ortholog 1 retrogene
retro_cjac_2312,
Dasypus novemcinctus ENSDNOG00000013888 ortholog_one2many 1 retrogene
retro_dnov_1786,
Homo sapiens ENSG00000182287 possible_ortholog 1 retrogene
retro_hsap_1849,
Macaca mulatta ENSMMUG00000014055 possible_ortholog 1 retrogene
retro_mmul_1716,
Monodelphis domestica ENSMODG00000017197 ortholog_one2many 7 retrogenes
retro_mdom_1189, retro_mdom_1329, retro_mdom_1441, retro_mdom_1470, retro_mdom_1616, retro_mdom_1987, retro_mdom_903,
Otolemur garnettii ENSOGAG00000011342 possible_ortholog 3 retrogenes
retro_ogar_2038, retro_ogar_265, retro_ogar_3453,
Procavia capensis ENSPCAG00000000733 ortholog_one2many 1 retrogene
retro_pcap_386,
Pteropus vampyrus ENSPVAG00000010218 ortholog_one2many 1 retrogene
retro_pvam_783,
Sorex araneus ENSSARG00000000117 ortholog_one2many 1 retrogene
retro_sara_575,
Sarcophilus harrisii ENSSHAG00000013119 ortholog_one2many 2 retrogenes
retro_shar_651, retro_shar_690,
Sus scrofa ENSSSCG00000012142 ortholog_one2many 1 retrogene
retro_sscr_998,
Ictidomys tridecemlineatus ENSSTOG00000010759 within_species_paralog 1 retrogene
retro_itri_1050,
Tupaia belangeri ENSTBEG00000008834 ortholog_one2one 2 retrogenes
retro_tbel_2173, retro_tbel_4575,
Tarsius syrichta ENSTSYG00000005290 ortholog_one2one 2 retrogenes
retro_tsyr_1953, retro_tsyr_854,
Vicugna pacos ENSVPAG00000007642 ortholog_one2many 1 retrogene
retro_vpac_596,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_131 78.07 54.29
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Download FASTA sequences of all ENSSTOG00000008517 retrocopies