Parental gene:

KN540828.1_FG001

Aliases:None
Description:None
Organism:Longstamen rice (Oryza longistaminata)
Coordinates:KN540828.1:34196..35322(+)


>KN540828.1_FG001
ATGTCGAAGGAGGTGAGCGAGGAGCCGGAGCACGTGCGGCCCAAGGACTACACCGACCCGCCGCCGGCGCCGCTGTTCGA
CGTCGGCGAGCTCCGGCTGTGGTCCTTCTACCGGGCGCTCATTGCGGAGTTCATCGCCACGCTCCTGTTCCTATACATCA
CCGTCGCCACCGTCATTGGGTACAAGGTGCAGTCGTCCGCCGACCAGTGCGGCGGCGTCGGCACCCTCGGCATCGCCTGG
GCCTTCGGTGGCATGATCTTCATCCTCGTCTACTGCACCGCCGGCATCTCCGGAGGGCACATTAACCCCGCGGTGACGTT
CGGGCTGCTGCTGGCGAGGAAGGTGTCGGTGATTCGCGCGGTGATGTACATCGTGGCGCAGTGCCTGGGCGGCATCGTGG
GCGTGGGCATCGTGAAGGGCATCATGAAGCACCAGTACAACGCCAACGGCGGCGGCGCCAACATGGTGGCCAGCGGCTAC
TCCACCGGCACCGCCCTCGGCGCCGAAATCATCGGCACCTTCGTCCTCGTCTACACCGTCTTCTCCGCCACCGACCCAAA
GCGCAATGCCCGCGACTCCCACGTCCCGGTGCTCGCGCCGCTGCCCATCGGGTTCGCCGTGTTCATGGTGCACCTGGCCA
CCATCCCCATCACCGGCACGGGCATCAACCCTGCCCGGAGCATCGGCGCCGCCGTCATCTACAACCAGAAGAAGGCATGG
GACGACCACTGGATCTTCTGGGCGGGGCCGTTCATCGGAGCGCTGGCGGCGGCGGCGTATCACCAGTACATCCTCCGGGC
GGCAGCCATCAAGGCGCTGGGCTCCTTCCGGAGCAACCCCAGCAACTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA009362 ortholog_one2many 1 retrogene
retro_oind_43,
Leersia perrieri LPERR04G03430 ortholog_one2one 1 retrogene
retro_lper_22,
Oryza brachyantha OB0038G10090 ortholog_one2many 1 retrogene
retro_obra_3,
Oryza barthii OBART04G05050 ortholog_one2one 1 retrogene
retro_obar_18,
Oryza glumaepatula OGLUM04G04240 ortholog_one2one 1 retrogene
retro_oglu_29,
Oryza meridionalis OMERI04G05010 ortholog_one2one 1 retrogene
retro_omer_6,
Oryza nivara ONIVA04G03300 ortholog_one2one 1 retrogene
retro_oniv_20,
Oryza punctata OPUNC04G04310 ortholog_one2one 1 retrogene
retro_opun_34,
Oryza rufipogon ORUFI04G05780 ortholog_one2one 1 retrogene
retro_oruf_16,
Oryza sativa japonica OS04G0233400 ortholog_one2one 1 retrogene
retro_osat_19,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_olon_7 66.17 92.91
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Download FASTA sequences of all KN540828.1_FG001 retrocopies