Parental gene:

PIP2-6, OS04G0233400

Aliases:None
Description:Probable aquaporin PIP2-6 [Source:UniProtKB/Swiss-Prot;Acc:Q7XLR1]
Organism:Rice subsp. japonica (Oryza sativa japonica)
Coordinates:4:8948359..8949943(-)


>OS04G0233400
ATGTCGAAGGAGGTGAGCGAGGAGCCGGAGCACGTGCGGCCCAAGGACTACACCGACCCGCCGCCGGCGCCGCTGTTCGA
CGTCGGCGAGCTCCGGCTGTGGTCCTTCTACCGGGCGCTCATTGCGGAGTTCATCGCCACGCTCCTGTTCCTATACATCA
CCGTCGCCACCGTCATTGGGTACAAGGTGCAGTCGTCCGCCGACCAGTGCGGCGGCGTCGGCACCCTCGGCATCGCCTGG
GCCTTCGGTGGCATGATCTTCATCCTCGTCTACTGCACCGCCGGCATCTCCGGAGGGCACATTAACCCCGCGGTGACGTT
CGGGCTGCTGCTGGCGAGGAAGGTGTCGGTGATTCGCGCGGTGATGTACATCGTGGCGCAGTGCCTGGGCGGCATCGTGG
GCGTGGGCATCGTGAAGGGCATCATGAAGCACCAGTACAACGCCAACGGCGGCGGCGCCAACATGGTGGCCAGCGGCTAC
TCCACCGGCACCGCCCTCGGCGCCGAAATCATCGGCACCTTCGTCCTCGTCTACACCGTCTTCTCCGCCACCGACCCAAA
GCGCAATGCCCGCGACTCCCACGTCCCGGTGCTCGCGCCGCTGCCCATCGGGTTCGCCGTGTTCATGGTGCACCTGGCCA
CCATCCCCATCACCGGCACGGGCATCAACCCTGCCCGGAGCATCGGCGCCGCCGTCATCTACAACCAGAAGAAGGCATGG
GACGACCACTGGATCTTCTGGGCGGGGCCGTTCATCGGAGCGCTGGCGGCGGCGGCGTATCACCAGTACATCCTCCGGGC
GGCAGCCATCAAGGCGCTGGGCTCCTTCCGGAGCAACCCCAGCAACTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA009362 ortholog_one2one 1 retrogene
retro_oind_43,
Oryza longistaminata KN540828.1_FG001 ortholog_one2one 1 retrogene
retro_olon_7,
Leersia perrieri LPERR04G03430 ortholog_one2one 1 retrogene
retro_lper_22,
Oryza brachyantha OB0038G10090 ortholog_one2many 1 retrogene
retro_obra_3,
Oryza barthii OBART04G05050 ortholog_one2one 1 retrogene
retro_obar_18,
Oryza glumaepatula OGLUM04G04240 ortholog_one2one 1 retrogene
retro_oglu_29,
Oryza meridionalis OMERI04G05010 ortholog_one2one 1 retrogene
retro_omer_6,
Oryza nivara ONIVA04G03300 ortholog_one2one 1 retrogene
retro_oniv_20,
Oryza punctata OPUNC04G04310 ortholog_one2one 1 retrogene
retro_opun_34,
Oryza rufipogon ORUFI04G05780 ortholog_one2one 1 retrogene
retro_oruf_16,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_osat_19 66.42 92.91
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Download FASTA sequences of all OS04G0233400 retrocopies