Parental gene: | OB0038G10090 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza brachyantha |
| Coordinates: | super0038:171606..173337(+) |
>OB0038G10090
ATGATGTGTCGCTACCTACCAAGCTTCGATGGCACAAGCCCACACCTTTCCCTCTCTCCTCTTTGTAATGACAGCACGGC
GCCTCAATATATAAAACCGGCCAGTCTCACGCTCGCGGCTCGCCCCTCCACATCCATCAGAGAAGAGAGAGAGAGACGAG
ACGAGAGCGCAGGAGAGCTCAGAGAGTGTGTGGTGTGTGTTGAGCTTGCTGAAAGGGGAGCGGCAATGTCGAAGGAGGTG
AGCGAGGAGCCGGAGCACGCGCGGCCCAAGGACTACACGGACCCGCCGCCGGCGCCGCTGTTCGACGTCGGAGAGCTCCG
GCTGTGGTCCTTCTACCGAGCGCTCATCGCGGAGTTCATCGCCACGCTCCTGTTCCTGTACATCACGGTGGCCACCGTCA
TCGGGTACAAGGTGCAGTCCTCCGCCGACCAGTGCGGCGGCGTTGGCACGCTCGGCATCGCCTGGGCCTTCGGTGGCATG
ATCTTCATCCTCGTCTACTGCACTGCCGGCATCTCGGGAGGGCACATCAACCCGGCGGTGACGTTCGGGTTGCTGCTGGC
GAGGAAGGTGTCGGTGATTCGCGCGGTGATGTACATCGTGGCGCAGTGCCTGGGCGGCATCGTGGGCGTGGGCATCGTCA
AGGGCATCATGAAGCACCAGTACAACGCCAACGGCGGCGGCGCCAACGTGGTGGCCAGCGGCTACTCCAACGGCACCGCC
CTCGGCGCCGAGATCATCGGCACCTTCGTCCTCGTCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCAACGCCCGCGA
CTCCCACGTCCCGGTGCTCGCGCCGCTCCCCATCGGGTTCGCCGTGTTCATGGTGCACCTGGCCACCATCCCCATCACCG
GCACCGGCATCAACCCTGCCCGGAGCATCGGCGCCGCCGTCATCTACAACCAGAAGAAGGCATGGGACGACCACTGGATC
TTCTGGGCGGGGCCGTTCATCGGAGCACTGGCGGCGGCGGCGTACCACCAGTACATCCTCCGCGCGGCGGCCATCAAGGC
GCTCGGTTCCTTCCGGAGCAACCCCAGCAACTGA
ATGATGTGTCGCTACCTACCAAGCTTCGATGGCACAAGCCCACACCTTTCCCTCTCTCCTCTTTGTAATGACAGCACGGC
GCCTCAATATATAAAACCGGCCAGTCTCACGCTCGCGGCTCGCCCCTCCACATCCATCAGAGAAGAGAGAGAGAGACGAG
ACGAGAGCGCAGGAGAGCTCAGAGAGTGTGTGGTGTGTGTTGAGCTTGCTGAAAGGGGAGCGGCAATGTCGAAGGAGGTG
AGCGAGGAGCCGGAGCACGCGCGGCCCAAGGACTACACGGACCCGCCGCCGGCGCCGCTGTTCGACGTCGGAGAGCTCCG
GCTGTGGTCCTTCTACCGAGCGCTCATCGCGGAGTTCATCGCCACGCTCCTGTTCCTGTACATCACGGTGGCCACCGTCA
TCGGGTACAAGGTGCAGTCCTCCGCCGACCAGTGCGGCGGCGTTGGCACGCTCGGCATCGCCTGGGCCTTCGGTGGCATG
ATCTTCATCCTCGTCTACTGCACTGCCGGCATCTCGGGAGGGCACATCAACCCGGCGGTGACGTTCGGGTTGCTGCTGGC
GAGGAAGGTGTCGGTGATTCGCGCGGTGATGTACATCGTGGCGCAGTGCCTGGGCGGCATCGTGGGCGTGGGCATCGTCA
AGGGCATCATGAAGCACCAGTACAACGCCAACGGCGGCGGCGCCAACGTGGTGGCCAGCGGCTACTCCAACGGCACCGCC
CTCGGCGCCGAGATCATCGGCACCTTCGTCCTCGTCTACACCGTCTTCTCCGCCACCGACCCCAAGCGCAACGCCCGCGA
CTCCCACGTCCCGGTGCTCGCGCCGCTCCCCATCGGGTTCGCCGTGTTCATGGTGCACCTGGCCACCATCCCCATCACCG
GCACCGGCATCAACCCTGCCCGGAGCATCGGCGCCGCCGTCATCTACAACCAGAAGAAGGCATGGGACGACCACTGGATC
TTCTGGGCGGGGCCGTTCATCGGAGCACTGGCGGCGGCGGCGTACCACCAGTACATCCTCCGCGCGGCGGCCATCAAGGC
GCTCGGTTCCTTCCGGAGCAACCCCAGCAACTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Oryza sativa indica | BGIOSGA009362 | ortholog_many2many | 1 retrogene | |
| Oryza longistaminata | KN540828.1_FG001 | ortholog_one2many | 1 retrogene | |
| Leersia perrieri | LPERR04G03430 | ortholog_one2many | 1 retrogene | |
| Oryza barthii | OBART04G05050 | ortholog_one2many | 1 retrogene | |
| Oryza glumaepatula | OGLUM04G04240 | ortholog_one2many | 1 retrogene | |
| Oryza meridionalis | OMERI04G05010 | ortholog_one2many | 1 retrogene | |
| Oryza nivara | ONIVA04G03300 | ortholog_one2many | 1 retrogene | |
| Oryza punctata | OPUNC04G04310 | ortholog_one2many | 1 retrogene | |
| Oryza rufipogon | ORUFI04G05780 | ortholog_one2many | 1 retrogene | |
| Oryza sativa japonica | OS04G0233400 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_obra_3 | 69.08 | 73.11 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OB0038G10090 retrocopies