RetrogeneDB - Parental gene PGSC0003DMG402024649 details

                            
>PGSC0003DMG402024649
ATGGGATCTGAATTGAGGATGTGGGTTTCAGACAGATTGATGTCTCTCTTGGGGTACTCACAGTCCACAGTTGTCTCTTA

TGTTCTTAATCTGGCTAAGAAAGCTTCGTCAGCTGCCAATCTAACAAATCAGCTTGTAGATGATATGGGTATGTCATCCT

CTAGTGAAACAAGAGTTTTTGCTCAAGAGATTTTTGAGAGAGTTGAACGCAAGACGACCGGGCCAAATCTATATTTACAA

CAAGAAAGGGAGGCTGCCATGTTGGCGAGGAAACAAAAGACATACTCACTTTTGGAGGCTGATGATGAAGATGAAAATAT

TGTTGGTGTGGAAAGTAATTCCGTTCCTTCTCAGACTAGGAAAGAGGATACCCGTACAAAGAAGTTTAGGAAGAGGGTTG

AGACCCATGAAGACGAAGATGATGAGGTAGTTAGGGATGAGGAGGATGATAGACGGGTTCGGAGACGAACTTCCCAAGAC

CAAGATGACAGTGACAACTCTGAGTCGGAAGAAGAAATACTTCGGGACCAAAGAGAGAGGGAGGAGTTAGAACGACATAT

CAGAGAGCGAGATGCTGCCGGGACTAGAAAGTTGGCAGAGCCAAAATTAACAAGGAGGGAGGAAGAAGAAGCAATCAGGA

GGGCTGATGCATTGGAGCAAGATGACATTGGATCTTTAAGGAAAGTTTCAAGACGAGAATACTTGAAGAAAAGGGAGCAG

AAGAAGCTAGAGGAACTCCGAGACGATTTAGAAGATGAACAATACTTGTTTGAGGGAGTGAAGCTGACAGAAGCAGAAGA

ACGTGAGCTAAGATATAAGAAGGAAATATATGAACTTGTTAAGAAGCGATCAGAAGATACCGGTGACATGGACGAGTATA

GGATACCTGATGCTTATGATCTTGAAGGTGGTGTAAATCAGGAAAAGAGGTTTTCGGTGGCTTCGCAGCGATACAGGGAT

CCAGATGCTGCTGAAAAGATGAATCCTTTTGCTGAACAAGAAGCATGGGAGGAACATCAGATTGGGAAGGCGAACCTTAA

ATTTGGGTCAAAAGATAGGAAGTCAAGATCTGATGACTACCAATTTGTGTTTGAAGACCAAATTGAGTTCATAAAGGCAG

CCGTAATGGATGGTGTTAATGTTGACCAAGAGCCTTCCATTGATTCAATAGAGAAAACTATGGCTAAGTCAGCGTTTGAA

AAACTCCAGGAGGATAGGAAGACCCTACCAATGTATCCCTACAGGGATGATTTGCTCCAAGCTATTAATGATCATCAGGT

TCTTGTTATTGTTGGAGAAACGGGCTCCGGGAAGACCACCCAGATACCACAGTATCTGCATGAGGCGGGATATACCAAAC

GTGGGAAGATTGGATGTACTCAACCTCGTCGAGTTGCTGCAATGAGTGTGGCTGCACGTGTTTCTCAAGAAATGGGAGTC

AAACTTGGCCATGAGGTTGGCTACTCTATTCGGTTTGAAGACTGCACCTCTGAGAAAACGATTCTGAAATATATGACCGA

TGGGATGCTGTTACGAGAATTCCTTGGTGAGCCTGATCTAGCAAGTTATAGTGTCATCATGGTCGACGAGGCACATGAAA

GAACACTTTCAACAGACATTTTGTTTGGCTTGGTTAAGGATATTTCTCGATTTCGGCCTGATCTGAAGTTGCTAATATCA

AGTGCTACTCTGGATGCAGAGAAGTTCAGTGATTATTTTGACTGTGCTCCAATTTTTAAAATTCCTGGAAGGCGGTTTCC

CGTTGAGATACACTATACGAAAGCTCCAGAGGCCGATTACTTGGATGCTGCAGTAGTCACCGCTCTTCAGATCCATGTAA

CTCAACCCCCGGGTGATGGTGATATATTAATCTTTTTGACTGGGCAGGAGGAGATTGAAACAGCAGAGGAGATCATTAAG

CACCGGATAAAAGGCCTGGGGACAAAAATTGCTGAGCTGATAATTTGCCCAATATATGCAAATTTGCCAACAGAATTACA

AGCCAAGATATTTGAGCCCACTCCTGAAGGTGCTCGTAAGGTTGTCCTGGCTACAAATATTGCTGAAACATCATTGACAA

TTGATGGGATTAAGTATGTTATTGATCCGGGTTTTTCTAAGATGAAGTCTTACAACCCTCGGACGGGAATGGAGTCATTA

TTGGTTGCTCCTATATCAAAGGCATCTGCGAACCAACGTGCTGGTCGATCTGGAAGAACAGGTCCTGGAAAATGCTTTCG

GTTATACACTGCATATAATTACATGAATGATTTGGAAGATAACACAGTTCCAGAAATACAAAGGACCAACCTTGCAAATG

TGGTGCTCTCTCTCAAGAGCCTTGGGATTCATGACTTGCTGAATTTTGACTTTATGGATCCCCCACCAGCAGAAGCTCTA

CTCAAAGCGCTGGAGTTACTTTTTGCCCTTAGTGCACTTAACAAGCTTGGCGAGTTGACTAAAGTTGGTAGAAGAATGGC

TGAGTTTCCTCTAGATCCCATGCTGTCCAAGATGATTGTTGCCTCTGACAAGTACAAGTGCTCTGATGAAATAATAAGTA

TTGCTGCCATGCTTTCTGTGGGGAATTCAATCTTTTATCGTCCAAAGGACAAACAAGTCCATGCAGATAATGCACGGATG

AATTTTCATGTGGGAAATGTGGGGGATCATATCGCTCTGCTAAAGGTTTACAGTTCCTGGAGGGAAACAGACTTTTCAAC

TCAGTGGTGCTATGAAAATTATATCCAGGTCAGAAGCATGAAGAGAGCAAGGGACATCCGAGATCAATTGGAAGGCCTGC

TAGAAAGGGTGGAAATTGAATTGACTTCAAATGACAATGACTATGAAGCTATAAAGAAGGCTATAACATCAGGATTTTTC

CCCCACTCTGCAAAACTACAAAAGAATGGATCTTATCGAACTATTAAACACCCCCAGACAGTTAATGTTCACCCCAGCTC

AGGTTTAGCTCAGGTGCTTCCCAGATGGGTTGTTTACCATGAGCTGGTCCTGACAACTAAGGAGTACATGCGACAGGTTA

CTGAACTTAAACCAGACTGGCTTGTAGAAATAGCTCCTCACTACTATCAGTTGAAAGATGTCGAAGACTCTAGCTCGAAG

AAAATGCCTCGCGGAACTGGCCGTGCATCTTAG

Species	Parental gene accession	Homology type	Retrogenes number
Oryza sativa indica	BGIOSGA027162	ortholog_many2many	1 retrogene	retro_oind_65,
Brachypodium distachyon	BRADI1G61220	ortholog_many2many	1 retrogene	retro_bdis_4,
Leersia perrieri	LPERR08G09260	ortholog_many2many	1 retrogene	retro_lper_14,
Hordeum vulgare	MLOC_5589	ortholog_many2many	1 retrogene	retro_hvul_14,
Oryza meridionalis	OMERI08G09070	ortholog_many2many	1 retrogene	retro_omer_5,
Oryza nivara	ONIVA08G11780	ortholog_many2many	1 retrogene	retro_oniv_26,
Oryza punctata	OPUNC08G10350	ortholog_many2many	1 retrogene	retro_opun_23,
Oryza glaberrima	ORGLA08G0098600	ortholog_many2many	1 retrogene	retro_ogla_26,
Oryza rufipogon	ORUFI08G12410	ortholog_many2many	1 retrogene	retro_oruf_44,
Sorghum bicolor	Sb04g022460	ortholog_many2many	1 retrogene	retro_sbic_37,
Setaria italica	Si021302m.g	ortholog_many2many	1 retrogene	retro_sita_41,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_stub_33	84.23	73.71	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all PGSC0003DMG402024649 retrocopies

Parental gene:	PGSC0003DMG402024649
Aliases:	None
Description:	EMB2733/ESP3 (EMBRYO DEFECTIVE 2733); ATP-dependent RNA helicase [Source:PGSC_GENE;Acc:PGSC0003DMG402024649]
Organism:	*Potato (Solanum tuberosum)*
Coordinates:	3:55261782..55281426(-)

Parental gene:

PGSC0003DMG402024649