Parental gene:

BRADI1G61220

Aliases:None
Description:None
Organism:Purple false brome (Brachypodium distachyon)
Coordinates:1:60555704..60565916(+)


>BRADI1G61220
ATGGCGAGCGACAGGCAGCTCAGGGATTGGGTCTCCGACAAGCTCATGTCCCTCCAAGGATTCACAACGACCGTCGTCGT
GCAGTATGTCATCAGGCTAGCTAAGGAATGCTCTTCTACTGGTGATCTCGTGGGGAAGCTCGTCGAGTACGGGTTCTCCT
CGTCCGCAGAGACAAGCAGCTTCGCAGCCGACATCTACGCCAAGGTCCCCCGCAGGGACCGCGGTATCAGCAATTACCAG
AAACAGGAAAGGGAGGCAGCAAAGCTTGTGAAGAAACAGAGCACTTACAAGTTGTTGGATGATGATGATGAGAATGATAT
TGACAACCACACGTCTATTGACAACCACACGTCAAGTTTGGCGAGCACACCCTCTAAGAGTAGGAAACATTTCAGGAGGA
GAGCTGAGGACCAAGAAGATTTGAAGGATGATGATGAAACAATAACACATGATTCTGAGAGAAGTGTGCGACGGCGAATA
GAAGAGGCGGATGACGAAGATGGTGATGAGACTTTTGATGAAGAACGAGAAATCATAAGAGATCAACAGGAAAGAGCTCA
GCTAGAGAAGAATATGAGAGAAAGAGACGCAGTTAACACTCGAAAGTTGATGGAGCGACAATTATCTAAGGAAGAACAAG
AGGACCTTACGAGACGATCTCAAGCAATGGACAAGAATGACACTTCAGATCTGAGAAATTTTTCAAGGCAAGCATACTTG
CAAAAGCGAAGGGACAAAAAAATTGATGAGATTCGGGACGAAATTCTTGATCATGAATACATTTTTCAGGATGTGAAACT
AACCGAAGCAGAAGAAAAGGACTTCAGATACAAGAAGAAGATTTATGATCATATTAAGGAGCGTGTTGAGAGTGCAGATG
ATATTGCTGAGTACAAAATGCCTGAAGCTTATGATATGGGTGAAGGTAATCAAGAAAAGAGATTCTCTGTTGCAATGCAG
CGATACAAAGATCCTGAGGCCAAAGATAAAATGAATCCTTTTGCTGAACAGGAAGCATGGGAAGAACATCAAATAGGAAA
GTCTAAACTGCAATTTGGATCGAAAGATAGGAAGCGGTCTTCTGATGAATATCAGTATGTATTTGATGATCAAATTGATT
TTGTTAAATCATCGGTCATAGAAGGAACACAGTTTGAAGACGATTCAGACCAAGAGACCATCGATGCAAAAGATATTTTA
AAAAGGGAGCTCCAGGATGAGCGGAAAACCCTTCCAATTTATAAATTCAGGGATGAACTGCTCAAGGCTGTTGATGAATA
TCAGGTTATTGTCATAGTGGGAGAAACCGGCTCTGGTAAAACAACACAAATACCTCAATATCTTCATGAAGCTGGATATA
CTGCAAGAGGAAAGGTTGCTTGTACGCAACCTCGTCGAGTGGCAGCCATGAGTGTTGCAGCAAGGGTGTCTCAAGAGATG
GGTGTTAAACTGGGACACGAGGTTGGTTACTCCATAAGGTTCGAGGATTGCACCTCAGAGAAAACAATGATTAAATACAT
GACAGATGGTATGCTTTTGAGGGAGTTTCTTGGTGAACCAGATTTGGCTGGCTATAGTGTTGTGATGGTCGATGAGGCTC
ATGAGCGTACACTGTCTACTGATATCTTATTTGGTTTGGTGAAGGATATTGCTAGGTTTCGTCCAGACCTAAAGTTGCTC
ATTTCAAGTGCAACCCTGGATGCAGAAAAATTTAGCGACTACTTTGATTCAGCTCCTATTTTCAAGATTCCTGGGAGGCG
ATACCCTGTTGAAGTTCATTATACAAAAGCTCCAGAAGCAGATTACATTGATGCTGCCATTGTCACTGTTTTACAGATAC
ATGTGACACAACCCCCTGGTGATATCCTAGTGTTCCTTACAGGGCAGGAAGAAATTGAAACAGTTGATGAAATCCTTAAA
CAAAGAACAAGGGGCTTAGGAACAAAGATTGCAGAACTAAACATATGCCCTATTTATGCAAATCTGCCTACTGAACTTCA
AGCTAAGATCTTTGAGCAAACCCCCGAAGGTTCTCGGAAAGTGGTCCTGGCCACTAATATAGCAGAGACTTCATTGACCA
TTGATGGTATAAAATATGTTATCGATCCAGGTTTCTGTAAGATCAAGTCATACAACCCCCGTACAGGAATGGAATCCCTG
CTTATCAATCCTATCTCAAAGGCATCAGCAAACCAGAGGGCAGGAAGATCTGGACGGACAGGACCTGGAAAATGTTTCCG
CCTGTACACAAGCTATAACTACATGCATGATCTTGAGGATAATACTGTTCCAGAGATTCAAAGAACCAACCTTGCAAATG
TTGTACTTACACTTAAGAGTCTTGGTATTCATGACTTGGTTAATTTTGATTTTATGGACCCACCTCCTTCAGAGGCCTTG
TTGAAGGCCCTGGAGCAACTTTTCGCTCTCAGTGCACTCAACAGTCGTGGAGAGTTGACGAAGACTGGAAGACGAATGGC
AGAATTTCCATTAGATCCTATGCTGTCAAAGATGATAGTAGCTTCAGAGAAATATAAGTGTTCTGATGAGGTCATCTCCA
TTGCGTCCATGTTGTCGATTGGCAATTCTATATTTTATCGTCCGAAGGACAAACAAGTTCATGCTGACAATGCAAGGTTG
AACTTCCACACTGGCAATGTCGGGGACCATATAGCATTACTCAATGTCTATAACTCCTGGAAAGAAACTGACTTTTCAAC
TCAATGGTGTTATGAAAATTATATACAGGTCCGCAGCATGAAGAGGGCAAGAGATATTCGAGATCAACTAGAAGGACTTC
TGGAGAGAGTTGAGATTGAGGTTTGTTCAAATGCCAGTGACTTGGATGCTATTAAAAAGGCTATAACATCAGGTTTCTTC
CACCATTCTGCACGGTTGCAGAAGAATGGTTCTTATAGAACTGTCAAGAACCCTCAGACTGTCTTTGTCCACCCTAGTTC
AGGATTAGCACAGCTACTTCCTCGATGGGTAATATACCATGAATTAGTTCTCACGACAAAAGAGTATATGCGGCAGGTGA
CAGAACTAAAACCTGAATGGCTGGTAGAAATTGCTCCACATTACTACCAATTGAAAGATGTGGATGACTCTGGTTCGAAG
AAGCTACCCAAAGGACAAGGACGAGCTGCATTATAG

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA027162 ortholog_one2one 1 retrogene
retro_oind_65,
Brassica oleracea Bo5g087070 ortholog_many2many 1 retrogene
retro_bole_7,
Brassica rapa Bra010168 ortholog_many2many 1 retrogene
retro_brap_26,
Glycine max GLYMA06G21821 ortholog_many2many 1 retrogene
retro_gmax_7,
Leersia perrieri LPERR08G09260 ortholog_one2one 1 retrogene
retro_lper_14,
Hordeum vulgare MLOC_5589 ortholog_one2one 1 retrogene
retro_hvul_14,
Oryza meridionalis OMERI08G09070 ortholog_one2one 1 retrogene
retro_omer_5,
Oryza nivara ONIVA08G11780 ortholog_one2one 1 retrogene
retro_oniv_26,
Oryza punctata OPUNC08G10350 ortholog_one2one 1 retrogene
retro_opun_23,
Oryza glaberrima ORGLA08G0098600 ortholog_one2one 1 retrogene
retro_ogla_26,
Oryza rufipogon ORUFI08G12410 ortholog_one2one 1 retrogene
retro_oruf_44,
Solanum tuberosum PGSC0003DMG402024649 ortholog_many2many 1 retrogene
retro_stub_33,
Prunus persica PRUPE_ppa000714mg ortholog_many2many 1 retrogene
retro_pper_32,
Sorghum bicolor Sb04g022460 ortholog_one2many 1 retrogene
retro_sbic_37,
Setaria italica Si021302m.g ortholog_one2one 1 retrogene
retro_sita_41,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_bdis_4 71.34 88.68
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Download FASTA sequences of all BRADI1G61220 retrocopies