RetrogeneDB ID: | retro_amel_29 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193570.1:483144..484137(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000019768 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | WDR5 | ||
Ensembl ID: | ENSAMEG00000011179 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.54 % |
Parental protein coverage: | 93.71 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SSATQSKPTPVKPNYALKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGI |
SSA..SK....KPNYALKFTL.GHT.AVSSVKFSPNGEWLASSSADK.I.IWGAYDGK.EKT..GH.L.I | |
Retrocopy | SSASRSKQMSEKPNYALKFTLMGHTEAVSSVKFSPNGEWLASSSADKVIIIWGAYDGKYEKTLYGHNLEI |
Parental | SDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT |
SDVAWSSDS..LVSASDDKTLKIWDV.SGKCLKTLKGHSNYVFCCNFNP.SNLI.SGSFDESV.IW.VKT | |
Retrocopy | SDVAWSSDSSRLVSASDDKTLKIWDVRSGKCLKTLKGHSNYVFCCNFNPPSNLIISGSFDESVKIWEVKT |
Parental | GKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYIL |
GKCLKTL.AHSDPVSAVHFN..GSLIVS.SYDG.CRIWD.ASGQCLKTL.DDDN.P.SFVKFSPNGKY.L | |
Retrocopy | GKCLKTLSAHSDPVSAVHFNCSGSLIVSGSYDGVCRIWDAASGQCLKTLVDDDNAPISFVKFSPNGKYLL |
Parental | AATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH |
.ATLDNTLKLWDYS.G.CLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH | |
Retrocopy | IATLDNTLKLWDYSRGRCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGH |
Parental | TDVVISTACHPTENIIASAALENDKTIKLWKSD |
TDVVIS.ACHPTENIIASAAL.NDKTIKLW.S. | |
Retrocopy | TDVVISAACHPTENIIASAALGNDKTIKLWMSN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |