RetrogeneDB ID: | retro_chof_1549 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_32170:9464..9889(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ZCRB1 | ||
Ensembl ID: | ENSCHOG00000004490 | ||
Aliases: | None | ||
Description: | zinc finger CCHC-type and RNA binding motif 1 [Source:HGNC Symbol;Acc:29620] |
Percent Identity: | 78.32 % |
Parental protein coverage: | 65.44 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | LFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGH-LSYACPKNMLGEREPPKKKEKKKKKKIPE |
LF.RVIKASIAIDNGR.AEFIRR.NYFDKSKCYE.GESGH.LSYACPKN.LGE.EPPKK.......KIPE | |
Retrocopy | LFDRVIKASIAIDNGRVAEFIRRQNYFDKSKCYEHGESGH<LSYACPKNRLGECEPPKKEKXXXXXKIPE |
Parental | PEEEIEEVEESEDEGEDPALDSLGQAIAFQQAKIEEEQKRWKPSSGDSSTSDDSRRPRIKKSTYFSDEEE |
.................PALDSLGQAIAFQQAKIEEEQKRWKPSSGDSSTSDDSRRPRIKKSTYFSDEEE | |
Retrocopy | XXXXXXXXXXXXXXXXXPALDSLGQAIAFQQAKIEEEQKRWKPSSGDSSTSDDSRRPRIKKSTYFSDEEE |
Parental | LSD |
LSD | |
Retrocopy | LSD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |