RetrogeneDB ID: | retro_mmur_1236 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | scaffold_35128:4995..5390(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | ZCRB1 | ||
Ensembl ID: | ENSMICG00000017422 | ||
Aliases: | None | ||
Description: | zinc finger CCHC-type and RNA binding motif 1 [Source:HGNC Symbol;Acc:29620] |
Percent Identity: | 75.94 % |
Parental protein coverage: | 60.83 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 1 |
Parental | GGLAPSKSTVYVSNLPFSLTNNDLYRXXXXXXXXXXVTIMKDKDTRKSKGVAFILFLDKDSAQNCTRAIN |
GGLA.SKSTVYVS..PFSLTNN.L.R..........VTIM.DKDTRK.KG..FILFLDKDSAQNC.RAIN | |
Retrocopy | GGLASSKSTVYVSS*PFSLTNNNLCRIFSKDGKVVKVTIMEDKDTRKIKGAGFILFLDKDSAQNCARAIN |
Parental | N-KQLFGRVIKASIAIDNGRAAEFIRRRNYFDKSKCYECGESGHLSYACPKNMLGEREPPKKK |
N..QLFGR..K.SI.IDNGRAA..IRR.NYFDKSKCYECGESG.LSYACPKNML.E.EPPKKK | |
Retrocopy | N<QQLFGRMPKTSIGIDNGRAAGCIRR*NYFDKSKCYECGESGQLSYACPKNMLEECEPPKKK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |