RetrogeneDB ID: | retro_tsyr_1842 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_617400:430..792(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2E3 | ||
Ensembl ID: | ENSTSYG00000002281 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2E 3 [Source:HGNC Symbol;Acc:12479] |
Percent Identity: | 80. % |
Parental protein coverage: | 58.94 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 3 |
Parental | EERKPSATQQKKNTKLSSKTTAKLSTSAKRIQKELAEITLDPPPNCSAGPKGDNIYEW-RSTILGPPGSV |
EE.KPSATQQKKNTKLSSKTTA.LSTSAK.I.KELAEITLD.PPNCS..PKGDNIYEW..STILGPPGSV | |
Retrocopy | EESKPSATQQKKNTKLSSKTTAQLSTSAKII*KELAEITLD-PPNCSSEPKGDNIYEW<GSTILGPPGSV |
Parental | YEGGVFFLDITFSSDYPFKPPKVTFRTRIY-HCNINSQGVICLDILK-DNWSPAL |
Y..GVFFLDIT.SS.YPFKPP.VTFR.RIY..CNI.SQGV.CLDIL..D..SP.. | |
Retrocopy | YAVGVFFLDITLSSYYPFKPPEVTFRIRIY<YCNIHSQGVVCLDILN>DTCSPTM |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |