RetrogeneDB ID: | retro_tsyr_1393 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_42438:2056..2446(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBE2E3 | ||
Ensembl ID: | ENSTSYG00000002281 | ||
Aliases: | None | ||
Description: | ubiquitin-conjugating enzyme E2E 3 [Source:HGNC Symbol;Acc:12479] |
Percent Identity: | 78.95 % |
Parental protein coverage: | 63.29 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | MCSDRQRSDDESPSTSSGSSDADQRDPAAPEPEEQEERKPSATQQKKNTKLSSKT-TAKLSTSAKRIQKE |
..SDRQRS.DE.P.TSSGSSD.DQ.D.AAPEP.EQEE..PSATQQKKNTKL.SKT..AKLSTSA.RIQ.E | |
Retrocopy | LSSDRQRSYDENPRTSSGSSDVDQQDLAAPEPKEQEEKRPSATQQKKNTKLFSKT<LAKLSTSAERIQ-E |
Parental | LAEITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGV-FFLDITFSSDYPFKPPKVTFRT |
LAEITLD.PPNCSAGPKGDNIYEWRSTIL.PP..V.EGG..FFLDI.FSSD..FKPPK.TF.T | |
Retrocopy | LAEITLDRPPNCSAGPKGDNIYEWRSTILTPPDCVHEGGI>FFLDIMFSSDFSFKPPKATFHT |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |