RetrogeneDB ID: | retro_vpac_59 | ||
Retrocopylocation | Organism: | Alpaca (Vicugna pacos) | |
Coordinates: | GeneScaffold_1333:73342..73571(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | SNRPG | ||
Ensembl ID: | ENSVPAG00000007452 | ||
Aliases: | None | ||
Description: | small nuclear ribonucleoprotein polypeptide G [Source:HGNC Symbol;Acc:11163] |
Percent Identity: | 71.43 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MSKAHPPELKKFMDKKLSLKLNGGRHVQGILRGFDPFMNLVIDECVEMATSGQ-QNNIGMVVIRGNSIIM |
.SKAH..ELK.FMDKK..LKLNGGRHVQGIL.G.D.FMNLV..ECVEMATSGQ..N..G.V...GN..I. | |
Retrocopy | VSKAHLDELKNFMDKKVLLKLNGGRHVQGILQGPDVFMNLVLEECVEMATSGQ>HNHTGRVGK*GNRVIT |
Parental | LEALERV |
LEALERV | |
Retrocopy | LEALERV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |