Parental gene:

BT.63774, ENSBTAG00000006884

Aliases:None
Description:Polyadenylate-binding protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q28165]
Organism:Cow (Bos taurus)
Coordinates:10:21427136..21434016(-)


>ENSBTAG00000006884
ATGGCGGCGGCGGCGGCGGCGGCAGCAGCAGCGGGGGCTGCGGGCGGTCGGGGCTCCGGGCCGGGGCGGCGGCGCCATCT
TGTGCCCGGGGCCGGTGGGGAGGCCGGGGAGGGGGCCCCGGGGGGCGCAGGGGACTACGGGAACGGCTTGGAGTCTGAGG
AACTGGAGCCTGAGGAGCTGCTGCTGGAGCCCGAGCCGGAGCCCGAGCCCGAAGAGGAGCCGCCCCGGCCCCGCGCCCCC
CCGGGAGCTCCGGGCCCTGGGCCTGGCTCGGGAGCCCCCGGCAATCAGGAGGAGGAGGAGGAGTCGGGACTGGTCGAGGG
TGACCCGGGGGACGGCGCCATTGAGGACCCGGAGCTGGAAGCGATCAAAGCTCGAGTTAGGGAGATGGAGGAAGAAGCTG
AGAAGCTAAAGGAGCTACAGAACGAGGTAGAGAAGCAGATGAATATGAGTCCACCTCCGGGCAATGCTGGCCCAGTGATC
ATGTCCATTGAGGAGAAGATGGAGGCTGATGCCCGTTCCATCTATGTTGGCAATGTGGACTATGGTGCAACAGCAGAAGA
GCTAGAAGCACACTTTCATGGCTGTGGTTCAGTCAACCGCGTAACTATACTCTGTGACAAATTTAGTGGCCATCCGAAAG
GGTTTGCGTATATAGAGTTCTCAGACAAAGAGTCAGTGAGGACTTCCCTGGCCTTAGATGAATCCTTATTTAGAGGAAGA
CAGATCAAGGTGATCCCTAAACGAACCAACAGACCAGGCATCAGCACAACAGACCGAGGCTTCCCACGAGCCCGATACCG
TGCCCGAACCACCAACTACAACAGTTCCCGCTCTCGATTCTACAGTGGTTTTAACAGCAGGCCCCGGGGTCGCGTCTACA
GGGGCCGGGCTAGAGCGACATCATGGTATTCCCCTTACTAA

Library Parental gene expression (RPM)
SRP017611_brain 161 .61 RPM
SRP017611_kidney 112 .79 RPM
SRP017611_liver 37 .23 RPM
ERP005899_muscle 63 .93 RPM
ERP005899_liver 80 .10 RPM
SRP030211_testis 217 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000023752 within_species_paralog 1 retrogene
retro_btau_972,
Callithrix jacchus ENSCJAG00000007960 ortholog_one2one 4 retrogenes
retro_cjac_1263, retro_cjac_2291, retro_cjac_3278, retro_cjac_3836,
Dipodomys ordii ENSDORG00000002873 ortholog_one2one 1 retrogene
retro_dord_606,
Homo sapiens ENSG00000100836 ortholog_one2one 1 retrogene
retro_hsap_4855,
Gorilla gorilla ENSGGOG00000022683 ortholog_one2one 2 retrogenes
retro_ggor_1454, retro_ggor_3030,
Mustela putorius furo ENSMPUG00000006775 ortholog_one2one 1 retrogene
retro_mputfur_496,
Mus musculus ENSMUSG00000022194 possible_ortholog 1 retrogene
retro_mmus_403,
Nomascus leucogenys ENSNLEG00000015009 ortholog_one2one 2 retrogenes
retro_nleu_2066, retro_nleu_3023,
Otolemur garnettii ENSOGAG00000008710 ortholog_one2one 1 retrogene
retro_ogar_797,
Pongo abelii ENSPPYG00000005663 ortholog_one2one 2 retrogenes
retro_pabe_1645, retro_pabe_3773,
Pan troglodytes ENSPTRG00000006168 ortholog_one2one 2 retrogenes
retro_ptro_1339, retro_ptro_3232,
Sus scrofa ENSSSCG00000002023 ortholog_one2one 1 retrogene
retro_sscr_625,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_693 94.74 73.86
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Download FASTA sequences of all ENSBTAG00000006884 retrocopies