Parental gene: | RPL10A, ENSBTAG00000019494 |
| Aliases: | None |
| Description: | 60S ribosomal protein L10a [Source:UniProtKB/Swiss-Prot;Acc:Q5E9E6] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 23:9391522..9394013(+) |
>ENSBTAG00000019494
ATGAGCAGCAAAGTCTCCCGCGACACCCTCTACGAGGCGGTGCGGGAAGTCCTGCACGGGAATCAGCGCAAGCGCAGAAA
GTTTTTGGAGACGGTGGAGCTTCAGATCAGCCTGAAGAACTATGACCCTCAGAAGGACAAACGCTTCTCGGGCACCGTCA
GGCTTAAGTCCACTCCCCGCCCCAAGTTCTCCGTGTGTGTCTTGGGGGACCAGCAGCATTGTGATGAGGCCAAGGCTGTG
GATATCCCCCACATGGACATCGAGGCGCTGAAAAAACTCAACAAGAATAAGAAACTGGTCAAGAAGCTGGCCAAGAAATA
TGATGCCTTTTTGGCTTCAGAGTCTCTGATCAAGCAGATCCCCCGAATCCTGGGCCCGGGCCTGAACAAGGCTGGCAAGT
TCCCTTCCTTGCTGACCCACAATGAGAACATGGTGGCCAAAGTTGATGAAGTGAAGTCCACGATCAAGTTCCAGATGAAG
AAGGTGCTGTGTCTGGCAGTGGCTGTTGGCCACGTGAAGATGACAGATGATGAGCTTGTGTACAACATCCACTTAGCTGT
CAACTTCCTGGTGTCATTGCTCAAGAAAAATTGGCAGAACGTCAGGGCCTTGTACATTAAGAGCACCATGGGCAAGCCCC
AGCGTCTGTACTAA
ATGAGCAGCAAAGTCTCCCGCGACACCCTCTACGAGGCGGTGCGGGAAGTCCTGCACGGGAATCAGCGCAAGCGCAGAAA
GTTTTTGGAGACGGTGGAGCTTCAGATCAGCCTGAAGAACTATGACCCTCAGAAGGACAAACGCTTCTCGGGCACCGTCA
GGCTTAAGTCCACTCCCCGCCCCAAGTTCTCCGTGTGTGTCTTGGGGGACCAGCAGCATTGTGATGAGGCCAAGGCTGTG
GATATCCCCCACATGGACATCGAGGCGCTGAAAAAACTCAACAAGAATAAGAAACTGGTCAAGAAGCTGGCCAAGAAATA
TGATGCCTTTTTGGCTTCAGAGTCTCTGATCAAGCAGATCCCCCGAATCCTGGGCCCGGGCCTGAACAAGGCTGGCAAGT
TCCCTTCCTTGCTGACCCACAATGAGAACATGGTGGCCAAAGTTGATGAAGTGAAGTCCACGATCAAGTTCCAGATGAAG
AAGGTGCTGTGTCTGGCAGTGGCTGTTGGCCACGTGAAGATGACAGATGATGAGCTTGTGTACAACATCCACTTAGCTGT
CAACTTCCTGGTGTCATTGCTCAAGAAAAATTGGCAGAACGTCAGGGCCTTGTACATTAAGAGCACCATGGGCAAGCCCC
AGCGTCTGTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 58 .88 RPM |
| SRP017611_kidney | 153 .22 RPM |
| SRP017611_liver | 130 .48 RPM |
| ERP005899_muscle | 878 .62 RPM |
| ERP005899_liver | 71 .95 RPM |
| SRP030211_testis | 62 .67 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000012921 | ortholog_one2one | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000005760 | ortholog_one2many | 6 retrogenes | |
| Monodelphis domestica | ENSMODG00000013766 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000037805 | ortholog_one2one | 8 retrogenes | |
| Ornithorhynchus anatinus | ENSOANG00000014574 | ortholog_one2many | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000002047 | ortholog_one2many | 1 retrogene | |
| Sus scrofa | ENSSSCG00000001543 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_87 | 97.70 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_138 | 97.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_btau_1501 | 66.83 | 94.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_btau_1634 | 83.33 | 71.43 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000019494 retrocopies